Gene Rxyl_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2906 
Symbol 
ID4117385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2909036 
End bp2910427 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content71% 
IMG OID638037676 
ProductNa+/solute symporter 
Protein accessionYP_645628 
Protein GI108805691 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTAGCG CCCTCGACTA CCTGGTCATC GGGCTCTACT TCGCCGCCAT GATCGCGGCG 
GGGTACTGGG GGCTCAGGCG CGCCCGCAGC GCGGACGACT ACCTGGTGGC CGGGCGGAGG
CTGGGGCCGC TGCTCTACAT CGGGACTTTA GGCGCGGTGG TGCTCGGCGG GGCCTCGACG
ATCGGGACGG TGGCCCTCGG CTACGAGAAC GGCGTCTCGG GGATGTGGCT CGTCTTCATG
ATCGGGCTCG GCATCATCGC GCTGGGGCTC TTGCTCTCCA CGCGCCTCAG CAGGCTCGGG
GTCTACACCG TCTCCGAGAT GCTCGGGCTC CGCTACGGGC CTTCGGCGCG CCTGATCTCC
GCGATCATCG TCGCCTCCTA CGCCCTGATG ATCGCCGTGA CCTCGACCAT CGCCATCGGC
ACGGTCTTCG ACGTCGTCCT CGGCCTGCCG CCGGCGGTCG CGATCCTGGT CGCCGGCGGC
GTCGTGGTCG CCTACTCGGT CGCGGGCGGT ATGTGGTCCA TCACCCTCAC GGACTTCCTG
CAGTTCTGCG TGATGACCGC GGGCATCTTC CTCGCCCTCC TGCCGCTCGC CGTAGCGCGC
GCCGGCGGCC TCTCGGGGAT GCGCGCGGAG CTCCCGGCCT CCTACTTCGA CCTCGCCTCC
ATCGGGTGGG GCACGATCTT CACCTACTTC CTGCTGTTCT TCTTCGGGCT CATGATCGGG
CAGGACATCT GGCAGCGGGT CTTCACCGCC CGCAGCGCGC CCGTGGCCCG CTGGGGCGGC
CTCGTCGCCG GGCTCTACTG CCTGCTCTAC GGGCTCGCGG GCGCCCTCAT CGGGACGGCG
GCCCGGGCCC TCGTCCCGGA CCTCCAGGTC GCGGACAACG CCTTCGCCCG CGTGGCGACC
GAGGTGCTGC CCGCGGGGCT CCTCGGCCTC GTGCTCGCCG CCGCGCTCGC GGCGGTCATG
TCCACGGCGA GCGCGGGGCT CCTTGCCTCC TCGACGATCC TCGCCAACGA CGTCTACGCC
GGGATCATCG CCCGCGAGGG CCGCAGCGAC CTCGGCGAGA GCCGCGTCTT CACCCTCATC
GTCGGCGTGG CCGTGCTCGC CATCTCGCTC GCCGTCCAGG ACGTCGTCGG CGCCCTGACC
ATCGCGTACA ACCTGCTCAC GGGGGCGCTC TTCGTGCCCA TCATCGGGGC GCTCTTCTGG
CGGCGCGCTA CGGGGGCCGG GGCGCTGGTC TCCATGCTGG TGAGCAGCGC CGTGGTCGTC
GCGCTCATGC TCTGGCAGGG TCTGCTCGCG AACTCCCCGA TCTACGTCGG GATGCTCACG
AGCCTCGTGG TCTTCGTGGG CGTGAGCCTC CTGACGCGCC CGCAGACGGC CGGGGACGCG
CCGCGCCTCT AG
 
Protein sequence
MVSALDYLVI GLYFAAMIAA GYWGLRRARS ADDYLVAGRR LGPLLYIGTL GAVVLGGAST 
IGTVALGYEN GVSGMWLVFM IGLGIIALGL LLSTRLSRLG VYTVSEMLGL RYGPSARLIS
AIIVASYALM IAVTSTIAIG TVFDVVLGLP PAVAILVAGG VVVAYSVAGG MWSITLTDFL
QFCVMTAGIF LALLPLAVAR AGGLSGMRAE LPASYFDLAS IGWGTIFTYF LLFFFGLMIG
QDIWQRVFTA RSAPVARWGG LVAGLYCLLY GLAGALIGTA ARALVPDLQV ADNAFARVAT
EVLPAGLLGL VLAAALAAVM STASAGLLAS STILANDVYA GIIAREGRSD LGESRVFTLI
VGVAVLAISL AVQDVVGALT IAYNLLTGAL FVPIIGALFW RRATGAGALV SMLVSSAVVV
ALMLWQGLLA NSPIYVGMLT SLVVFVGVSL LTRPQTAGDA PRL