| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2903 |
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| Symbol | |
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| ID | 4117383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2904519 |
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| End bp | 2905835 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037674 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_645626 |
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| Protein GI | 108805689 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0048698 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGAG CTGCGAGGAT CAGGACGGAG ATACCGGGCC CCAGGAGCCG GGCGCTCACC
GAGCGGCGGC GCAGGGCCAT CTCCGCGGGG CTGGGCACGG CGCTGCCGAT CTGGGTCGCC
GAGGCCCACG GGGCGCTGGT GACCGACGTG GACGGCAACA CGTTCATAGA CTTCGGGGGC
GGCATCGGCG TTCTCAACGC CGGGCACACC CACCCGCGGG TGGTGGAGGC GGTCAGGGAG
CAGGTGGGCC GGCTGACGCA CGCCTGCTAC TACGTGAGCC AGTACGAGCC CTACCTGGAG
CTGGCCGAGA AGCTCAACGA GCTGGTCCCC GGAAACTTCG AGAAGCGGAG CATCTTTGTC
AACTCCGGGG CCGAGGCGGT GGAGAACGCG ATCAAGATCT CCCGCTCCTA CACCCGCCGC
CCGGCGATCC TGGCCTTCGA GAACGCCTTC CACGGCCGCA CGATGCTGGG GATGAGCCTC
ACGGGCAAGG CGGACCCCTA CCGCAGGGGC TTCGGGCCCT TCGTGCCGGA GGTCTACCGG
GTGCCGGCCC CCTACGCCTA CCGGATGCCG AAGGAGGAGA GCTGGTTCGA CGCCTTCCGG
CGCTCGCTGG TGAGCGTGGA CGTGAGCAGC GTGGCGGCGG TCATCGTCGA GCCGGTGCTC
GGCGAGGGCG GCTTTATCCC CTTCCCGCCG GAGGACCTGC GCCGCCTGCG GGAGTGGTGC
ACGGAGAACG GGGCGGTGAT GGTGGTCGAC GAGGTCCAGA CGGGCTTCGG ACGGACGGGG
AAGATGTTCG CCATCGAGCA CTCCGGGGTG GAGCCGGACA TAGTGACCAC CGCCAAGAGC
CTCGGCGGCG GGATGCCCAT CGCCGGGGTG ACGGGGAGGG CGGAGATCAT GGACTCCGTC
CACGCCGGGG GCCTGGGCAC CACCTACGGC GGCAACCCCG CGGCCTGCGC CGCGGCCCTG
GCCGTGATCC GGGCCTTCGA GGAGGAGAAT CTGCTGGAGC GCTCGGTGCG CGTCGGGGAG
CGGGTGATGG AGGAGCTGCG CGCGATCCAG CGCCGCCACC CGGACTTCGT GGGCGACGTG
CGGGGCCTGG GAGCGATGGC GGCGATGGAG CTGGTCACCG ACGCCCGGAG CAAGACCCCG
GACCCGGCGC GGACCAAGGG CGTGGTGGAG CACGCCTTGC AGGAGGGCCT GATGCTGCTG
ACCGCGGGCG CTTACGGGAA CGTGATCCGC ACGCTGATGC CCCTCGTGAT CACCGACTCC
GAGCTGGAGG AGGGGCTCTC CATCCTCTCC CGGGCGGTGG ACGCGGCGGC CGCCTGA
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| Protein sequence | MLRAARIRTE IPGPRSRALT ERRRRAISAG LGTALPIWVA EAHGALVTDV DGNTFIDFGG
GIGVLNAGHT HPRVVEAVRE QVGRLTHACY YVSQYEPYLE LAEKLNELVP GNFEKRSIFV
NSGAEAVENA IKISRSYTRR PAILAFENAF HGRTMLGMSL TGKADPYRRG FGPFVPEVYR
VPAPYAYRMP KEESWFDAFR RSLVSVDVSS VAAVIVEPVL GEGGFIPFPP EDLRRLREWC
TENGAVMVVD EVQTGFGRTG KMFAIEHSGV EPDIVTTAKS LGGGMPIAGV TGRAEIMDSV
HAGGLGTTYG GNPAACAAAL AVIRAFEEEN LLERSVRVGE RVMEELRAIQ RRHPDFVGDV
RGLGAMAAME LVTDARSKTP DPARTKGVVE HALQEGLMLL TAGAYGNVIR TLMPLVITDS
ELEEGLSILS RAVDAAAA
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