Gene Rxyl_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2895 
Symbol 
ID4117356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2896696 
End bp2897316 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID638037666 
Producthypothetical protein 
Protein accessionYP_645618 
Protein GI108805681 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00219687 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGGCG AGAAGGGCGT TGGTCTCGAG CGCGTCGTGT TCTTCAGCGA CGCGGTCTTC 
GCCATCGCCA TCACCCTGCT GGTGCTGGAC ATCCGGGTGC CGGAGATACC GGGGGCGCTG 
GTGGACGAGC GGCTCCCGGA GGAGCTGGCC GCCCTCTGGC CCAAGTACCT GAGCTACGTC 
CTCAGCTTCG TGGTCATCAC CATGTACTGG ATGGGACACC ACAGCATCTT CTCCTACATC 
AGGGGCTACG ACCGCACCCT GATGTGGCTG AACGCGCTGT TCCTCATGGC GATAGCCTTT 
CTGCCGTTCC CGACCTCCCT GCTCGGGGAG TACGGCGAGC ACCGGCTCGC GGTCGTGGTC 
TACGCCGGGA GCCTCGCGGT CGCGAGGCTG CTCCTGACGG CGGTGTGGTG GTACGCCTCG 
GCGGGCCGCC GGCTGGTGGA CCGCGGCCTG AGCGAACGGA TGGTGAGGGC CCACCTCCTC 
CGGGGCCTCG CGATGCCGGC GGTCTTCGTG CTCTCCATCG GGGTCTCTTT CCTCAGCCTG 
AGCGCCGCGA TGTACACCTG GGGGCTTTTG GTGGCGGCCG ACCTGCTGGC GCAGCGGGCG 
CTGCGCCGCC GGGGGTGGTA G
 
Protein sequence
MEGEKGVGLE RVVFFSDAVF AIAITLLVLD IRVPEIPGAL VDERLPEELA ALWPKYLSYV 
LSFVVITMYW MGHHSIFSYI RGYDRTLMWL NALFLMAIAF LPFPTSLLGE YGEHRLAVVV 
YAGSLAVARL LLTAVWWYAS AGRRLVDRGL SERMVRAHLL RGLAMPAVFV LSIGVSFLSL 
SAAMYTWGLL VAADLLAQRA LRRRGW