Gene Rxyl_2875 details

Gene Information

• Locus tag: Rxyl_2875
• Symbol: nrdR
• ID: 4115871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 2878677
• End bp: 2879147
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638037646
• Product: transcriptional regulator NrdR
• Protein accession: YP_645598
• Protein GI: 108805661
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.362854
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGTGCC CGTACTGTGA CCACGAGGAC ACCAAGGTGA TAGACTCCCG GCTCTCCGAG 
GCCAAGGATG CCATCAGGCG TCGGCGGGAG TGCCTTGCGT GCGGCAAGCG GTTCACCACC 
TACGAGCGCA GGGAGCCGCT CAGGCTGATG GTTCTGAAGC GCGACGGGCG CCGGGAGCCG 
TTTGACAGGG AGAAGCTGCG GGCGGGGCTG GAGAAGGCCT GTGCCAAGCA GCGGGTCACG 
GGCGAGCAGA TAGACCTCAT CGTGGACCAG ATAGAGGCTG AGCTGCGCGA GCGGCGGCGG 
CACGAGGTTA CCTCGCGCCG GATCGGGGAC ATGGTGCTTG CGCGGCTCCG GCGGCTGGAC 
ATGGTGGCCT ACCTGCGTTT CGCCTCCGTC TACCGGCAGT ACACGGACGT GGACCAGTTC 
AGGTCCGAGC TGCTCCGGCT GGCCGGGAGC GGGATGTCCA AGGGGGGCTG A 

 

Protein sequence

MQCPYCDHED TKVIDSRLSE AKDAIRRRRE CLACGKRFTT YERREPLRLM VLKRDGRREP 
FDREKLRAGL EKACAKQRVT GEQIDLIVDQ IEAELRERRR HEVTSRRIGD MVLARLRRLD 
MVAYLRFASV YRQYTDVDQF RSELLRLAGS GMSKGG