Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2866 |
Symbol | fumC |
ID | 4115863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2869435 |
End bp | 2870826 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638037637 |
Product | fumarate hydratase |
Protein accession | YP_645590 |
Protein GI | 108805653 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGAG AATACCGGAC GGAGCGCGAC TCCATGGGGG AGGTCCGGGT TCCCGAGGAG GCCCTCTACG GGGCCCAGAC CCAGCGGGCG GTCGAGAACT TCCCCATAAG CGGCCTGCGG CTCCCCCGGC GGTTCATCCA GGCGCTCGGG GCCATAAAGC TGGAGGCCGC GGTGGTGAAC AACGAGCTGG GGCTGCTGGA CGGCAGGCTC AGGGACGCCA TCGTGCGGGC CGCGGAGGAG GTGGTGGAGG GCGCCCTCGA CGAGCACTTC GTGGTGGACG TCTTCCAGAC CGGCAGCGGC ACCTCCACCA ACATGAACGC CAACGAGGTC ATCGCCAACC GGGCCATCCA GCTCCTGGGC GGCAAGGTCG GCTCCCGCGA CCCCGTCCAT CCCAACGACC ACGTCAACAA GGGCCAGTCC TCGAACGACG TGATCCCGAC GGCCATACAC CTCTCGGTCC TGATCTCCTT CAAGGAGGAT CTGTTCCCGG CGCTGGAGGG GATGCAGCGG GCGCTGGAGG AGAAGGCCCG CGAGTTCGAC GGCGTGATCA AGACCGGCCG CACCCACCTG CAGGACGCCA CCCCGATCCG GCTCGGCCAG GAGTTCGCCG GCTACGCCGG GCAGATAGAG CGCGGCCTCC GGCGCCTGAG GAGGGCCGCC GAGGACCTCT CCGAGGTCGC CCTGGGCGGC ACCGCCGTGG GCACCGGGGT CAACACCCAC CCGGAGTTCG CCCGGCGCGT CTGCGAGCGC CTCTCCCGCC GCTTCGGGGT GGAGGTGCGC GAGACGGAGA ACCACTTCCA GGCCCAGAGC GCCATGGACG CCGCGGTGTT CGCCGGCGGG GCCTTGAGGA CCGTCGCCGG GAGCATCATG AAGATCTCCA ACGACATCCG CTGGATGGGG AGCGGGCCGC GGGCGGGGAT CGGCGAGCTG GCCCTCCCCG AGGTGCAGCC GGGCTCCTCC ATCATGCCCG GCAAGGTGAA CCCGGTGATC GCCGAGAGCG CCTGCCAGGT CTGCGCCCAG GTGATGGGCA ACGACCTCAC GGTCGCCCTC GGCGGGCAGA GCGGCAACTT CGAGCTGAAC GTCATGCTCC CGGTCATCGC CTACAACCTG CTGCAGTCGA CCTCCCTGCT CGCCGCCACG GCCGCCAACC TCACCGACAG GTGCATCTCT GGCCTCAGGG CCACCGGGCG GGGTCCGGAG CTGGTGGAGC AGGGGCTCAT GCTGGCCACC GCCCTCGCCC CGGTCATCGG CTACGACGCG GCGGCCGAGA TCTCCAAGGA GGCCTACAGA ACCGGCAAAA CCATCCGGGA GGTGGCCCGC GAGAGGACGG ACCTCTCCGA GGAGGAGCTG GAGAGGCTGC TGGACGCCCG CAAGATGACC GGGGACCGCT AG
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Protein sequence | MTREYRTERD SMGEVRVPEE ALYGAQTQRA VENFPISGLR LPRRFIQALG AIKLEAAVVN NELGLLDGRL RDAIVRAAEE VVEGALDEHF VVDVFQTGSG TSTNMNANEV IANRAIQLLG GKVGSRDPVH PNDHVNKGQS SNDVIPTAIH LSVLISFKED LFPALEGMQR ALEEKAREFD GVIKTGRTHL QDATPIRLGQ EFAGYAGQIE RGLRRLRRAA EDLSEVALGG TAVGTGVNTH PEFARRVCER LSRRFGVEVR ETENHFQAQS AMDAAVFAGG ALRTVAGSIM KISNDIRWMG SGPRAGIGEL ALPEVQPGSS IMPGKVNPVI AESACQVCAQ VMGNDLTVAL GGQSGNFELN VMLPVIAYNL LQSTSLLAAT AANLTDRCIS GLRATGRGPE LVEQGLMLAT ALAPVIGYDA AAEISKEAYR TGKTIREVAR ERTDLSEEEL ERLLDARKMT GDR
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