Gene Rxyl_2866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2866 
SymbolfumC 
ID4115863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2869435 
End bp2870826 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content70% 
IMG OID638037637 
Productfumarate hydratase 
Protein accessionYP_645590 
Protein GI108805653 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAG AATACCGGAC GGAGCGCGAC TCCATGGGGG AGGTCCGGGT TCCCGAGGAG 
GCCCTCTACG GGGCCCAGAC CCAGCGGGCG GTCGAGAACT TCCCCATAAG CGGCCTGCGG
CTCCCCCGGC GGTTCATCCA GGCGCTCGGG GCCATAAAGC TGGAGGCCGC GGTGGTGAAC
AACGAGCTGG GGCTGCTGGA CGGCAGGCTC AGGGACGCCA TCGTGCGGGC CGCGGAGGAG
GTGGTGGAGG GCGCCCTCGA CGAGCACTTC GTGGTGGACG TCTTCCAGAC CGGCAGCGGC
ACCTCCACCA ACATGAACGC CAACGAGGTC ATCGCCAACC GGGCCATCCA GCTCCTGGGC
GGCAAGGTCG GCTCCCGCGA CCCCGTCCAT CCCAACGACC ACGTCAACAA GGGCCAGTCC
TCGAACGACG TGATCCCGAC GGCCATACAC CTCTCGGTCC TGATCTCCTT CAAGGAGGAT
CTGTTCCCGG CGCTGGAGGG GATGCAGCGG GCGCTGGAGG AGAAGGCCCG CGAGTTCGAC
GGCGTGATCA AGACCGGCCG CACCCACCTG CAGGACGCCA CCCCGATCCG GCTCGGCCAG
GAGTTCGCCG GCTACGCCGG GCAGATAGAG CGCGGCCTCC GGCGCCTGAG GAGGGCCGCC
GAGGACCTCT CCGAGGTCGC CCTGGGCGGC ACCGCCGTGG GCACCGGGGT CAACACCCAC
CCGGAGTTCG CCCGGCGCGT CTGCGAGCGC CTCTCCCGCC GCTTCGGGGT GGAGGTGCGC
GAGACGGAGA ACCACTTCCA GGCCCAGAGC GCCATGGACG CCGCGGTGTT CGCCGGCGGG
GCCTTGAGGA CCGTCGCCGG GAGCATCATG AAGATCTCCA ACGACATCCG CTGGATGGGG
AGCGGGCCGC GGGCGGGGAT CGGCGAGCTG GCCCTCCCCG AGGTGCAGCC GGGCTCCTCC
ATCATGCCCG GCAAGGTGAA CCCGGTGATC GCCGAGAGCG CCTGCCAGGT CTGCGCCCAG
GTGATGGGCA ACGACCTCAC GGTCGCCCTC GGCGGGCAGA GCGGCAACTT CGAGCTGAAC
GTCATGCTCC CGGTCATCGC CTACAACCTG CTGCAGTCGA CCTCCCTGCT CGCCGCCACG
GCCGCCAACC TCACCGACAG GTGCATCTCT GGCCTCAGGG CCACCGGGCG GGGTCCGGAG
CTGGTGGAGC AGGGGCTCAT GCTGGCCACC GCCCTCGCCC CGGTCATCGG CTACGACGCG
GCGGCCGAGA TCTCCAAGGA GGCCTACAGA ACCGGCAAAA CCATCCGGGA GGTGGCCCGC
GAGAGGACGG ACCTCTCCGA GGAGGAGCTG GAGAGGCTGC TGGACGCCCG CAAGATGACC
GGGGACCGCT AG
 
Protein sequence
MTREYRTERD SMGEVRVPEE ALYGAQTQRA VENFPISGLR LPRRFIQALG AIKLEAAVVN 
NELGLLDGRL RDAIVRAAEE VVEGALDEHF VVDVFQTGSG TSTNMNANEV IANRAIQLLG
GKVGSRDPVH PNDHVNKGQS SNDVIPTAIH LSVLISFKED LFPALEGMQR ALEEKAREFD
GVIKTGRTHL QDATPIRLGQ EFAGYAGQIE RGLRRLRRAA EDLSEVALGG TAVGTGVNTH
PEFARRVCER LSRRFGVEVR ETENHFQAQS AMDAAVFAGG ALRTVAGSIM KISNDIRWMG
SGPRAGIGEL ALPEVQPGSS IMPGKVNPVI AESACQVCAQ VMGNDLTVAL GGQSGNFELN
VMLPVIAYNL LQSTSLLAAT AANLTDRCIS GLRATGRGPE LVEQGLMLAT ALAPVIGYDA
AAEISKEAYR TGKTIREVAR ERTDLSEEEL ERLLDARKMT GDR