| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2850 |
|---|
| Symbol | |
|---|
| ID | 4115827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2856111 |
|---|
| End bp | 2856893 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638037620 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_645574 |
|---|
| Protein GI | 108805637 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000441287 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGGGCA CGGCTGCTAA CAGGTCATCG CGGGGGGAGG TTCAGTCGCT GGCGCGGGCT
CTGGACATCC TGGAGCTGCT GGGCCGCTCG GAGAGCGAGC TGGGGGTGAC GGAGATAGGT
CCTGCGGTGG GTTTGCCTAA CGGGACGGCC CACCGGCTCC TGGCCACCCT CACCCGCCGG
GGCTACGCCC GGCAGGTCGG CGAGAGCCGC AAGTACACCC TGGGCCCGAA GGCGCTGGTT
CTGGCCTCCT CGGCGCGCGA GCACCTGGGC TCGCTGGCGC AGCCGTACCT GGAGGAGCTG
ATGGAGATCA GCCAGGAGTC CTCCAACCTG GCCACCCTGG ACCGCAACGC GGTGGTCTAC
ATAGAGCAGG TGCCCGCCCC CCGCATGGTC CGGATGTTCA CCGAGCCGGG CAACCGGGTC
CCCCCCCACG CCACGGGCAC GGGCAAGGTG CTGCTGGCCT ACCACCCGGA GGAGGTGGTG
GAATCGGTGA TACAGCAGAC CGGCCTGGTC CGCTTCACCG CCCACACCGT GACCGACCCG
CGCCGCCTCC GCCGGGAGCT GGCCGCGATC CGGGAGCAGG GCTACGCCAT CGACTCGGAG
GAGATGGAGG AGGGCGTCCG CTGCCTCGCC GCCCCCGTGT TCGGTCCGGA CGGAAAGATC
CTCGCGGCCA TGAGCGTCTC AGGCCCCGCA GGAAGGCTGA GCGAAGCCCG GCTCGAGGAG
CTGATCCCGC ACATAAAGCG CATCGCGGAC GAGTTCTCCC GCGACCTGCA GGGCACCGCC
TGA
|
|---|
| Protein sequence | MAGTAANRSS RGEVQSLARA LDILELLGRS ESELGVTEIG PAVGLPNGTA HRLLATLTRR
GYARQVGESR KYTLGPKALV LASSAREHLG SLAQPYLEEL MEISQESSNL ATLDRNAVVY
IEQVPAPRMV RMFTEPGNRV PPHATGTGKV LLAYHPEEVV ESVIQQTGLV RFTAHTVTDP
RRLRRELAAI REQGYAIDSE EMEEGVRCLA APVFGPDGKI LAAMSVSGPA GRLSEARLEE
LIPHIKRIAD EFSRDLQGTA
|
|---|
| |