| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2842 |
|---|
| Symbol | |
|---|
| ID | 4115819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2849462 |
|---|
| End bp | 2850046 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638037612 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding protein |
|---|
| Protein accession | YP_645566 |
|---|
| Protein GI | 108805629 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTCC CCCGGATAAC GCTGGAGCTG CCCGGATGGG TGGAGGAGCT CGTCGAGAGC
AGGGGCCGCG TCTACCCCTC CGTGGAGGAC AGGATGCGCC TCGCCGTGGA GCTCTCGCGG
CTCAACGTCG AGCACCGCAC CGGCGGGCCC TTCGGGGCGG CCATCTTCGA GGAGGAGAGC
GGGAGGCTGC TCGCCCCCGG CGTCAACCTC GTGGTCCCCT CCAGCTGCTC CGTCGCCCAC
GCCGAGGTCG TCGCCATAAT GGTCGCCCAG AGGAGCCTGG GGCACTTCGA CCTCGGCGGC
CCCGGCATGC CGCGCTACCA GCTCTTCGCC AGCACCGAGC CGTGCGCCAT GTGCTTCGGG
GCCACCACTT GGTCGGGGGT CAGGAGCCTG GTCTGCGGCG CCCGGGACGA GGACGCCCGG
GCGGTGGGCT TCGACGAGGG GGCCAAGGTG GAGCGTTGGA TCTCGGCGCT CGAGGAGCGG
GGCATCTCCG TCCGACGGGA CGTGCTGCGC GAGGAGGCCG CCGCGGTGCT CCGCCGCTAC
GCCGAGGGAG AGAACGTGAT CTACAACGCC CGGCAGGGCA GCTAG
|
|---|
| Protein sequence | MGFPRITLEL PGWVEELVES RGRVYPSVED RMRLAVELSR LNVEHRTGGP FGAAIFEEES
GRLLAPGVNL VVPSSCSVAH AEVVAIMVAQ RSLGHFDLGG PGMPRYQLFA STEPCAMCFG
ATTWSGVRSL VCGARDEDAR AVGFDEGAKV ERWISALEER GISVRRDVLR EEAAAVLRRY
AEGENVIYNA RQGS
|
|---|
| |