| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2820 |
|---|
| Symbol | |
|---|
| ID | 4117651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2826541 |
|---|
| End bp | 2827068 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638037590 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_645544 |
|---|
| Protein GI | 108805607 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4244] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATC CGATCCATTC CATGCTGGTA CCGTTTCCGC TGGGGCTGCT CACGGCGTCG
GTGATCTTTG ACATCCTCTA TCTGATCACG GGCGGCGGGC GGTGGGCTGG GATCTCTTTC
TGGATGATCG CCGCCGGGGT GATAGGTGGG CTCGCTGCGG CGGTATTCGG GTTGATCGAC
TGGCTGGCGA TACCTTCCGG CACGCGCGCC AAGTCGGTGG GGCTGTTGCA TGGCGCGAGC
AACGTCCTCA TGGTGGCGCT CTTTGCCGCA AGCTGGCTGC TGCGCGCGGG AGCGCCGACC
ACGCCGGAGG CCCTGGCCAT CGCTCTCTCC TTCGCGGGCG TGGTGCTGGC CTCGCTGGGA
GGCTTCCTGG GAGGCGAGCT GGTCGTGAGG ATGGGCGTGG GGATCTCCGA CGGGGCGAAC
CTCAACGCCC CCGGCCCCCT CTTCGGGCGG CGGGCCGGAG GGAGCCCGCC CCGGACACGG
AGAGCGGAAC AAAGATCTCC CCGGCGGCCC GATGAGAGGA GCTCATAA
|
|---|
| Protein sequence | MGHPIHSMLV PFPLGLLTAS VIFDILYLIT GGGRWAGISF WMIAAGVIGG LAAAVFGLID
WLAIPSGTRA KSVGLLHGAS NVLMVALFAA SWLLRAGAPT TPEALAIALS FAGVVLASLG
GFLGGELVVR MGVGISDGAN LNAPGPLFGR RAGGSPPRTR RAEQRSPRRP DERSS
|
|---|
| |