| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2810 |
|---|
| Symbol | |
|---|
| ID | 4117642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2819075 |
|---|
| End bp | 2820580 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638037581 |
|---|
| Product | putative signal transduction histidine kinase |
|---|
| Protein accession | YP_645535 |
|---|
| Protein GI | 108805598 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGCA GCGCCTTCTC CCTGCGGCGG CTGCGGTGGA AGCTGACGCT CAGCTACACG
CTGGTCACGG TGGTGGCCCT GCTCGTCCTG GAGCTGCTTT TGGCCAGCGG GATCATCGCC
TTTCTCAACT CGGACCTGCT GCCCCGGTTC GTCGGCCAGC AGCTCAGGGA CGAGTTCGCG
CCCCGTCTCG AGGCTCCTCT GAGCCGGACG CCCCCGGACA CCGCGCGGCT GCGGGAGGAG
CTCACCTGGT TCGCCGACAA CTCCGGCATC CGCGGCGCGG ACGCCGCCTC CCCGGAGACC
GGGCTCGGGG TCAGGGTCAG CGCGGACGAG GGCGCGCTGT TCGTGGTGGA CGAGCGGCGG
CGCCTCCTGG TCTCCGTGCC CAGGCTGGAG GGGTTCCCCG AGGGCCGGCC CTTCGAGGCC
GGGCGCGTGC CGGGCCTGGA CCCGCTCATA GACCGGGCCT TCGACGGCGA GGAGAACTCC
GGCCGGCTCT CCTCGAACAC CGACGGGCGC GTGTTGACGG TCACGCCCAT AGAGGGGGAC
GACGGTCGCG TCAACGGGGT GCTCGTGGGG ACCTTCAGGA TGCCGAACCT CACGGGGCCG
CTCCTGATCA CGGTGGGCGC GAGCGCCATC CTCCTGACGG TCCCCGCCGG CGTCCTCGGC
ATGGTCTTCG GCTTCGTCAC GGCTTGGGGG CTGACCCGCC GGCTGCAGCG GGTGGTCTAC
GCCGCGCGCG CCTGGAGCCG GGGTGACTTC TCGGTCGTCG TCAGGGACCG CTCGAAGGAC
GAGCTAGGCC AGCTCTCCCG CGAGCTGAAC CTGATGGCCG AGCGCCTCGA CGCCCTCGTG
CAGAGCCGCC AGGAGCTGGC GACCCTGGAG GCGCGCAACC AGTTCGCCCG CGACCTGCAC
GACTCCGTGA AGCAGCAGGT CTTCGCGACC TCGCTGCAGC TCGCCGCGGC CCGGGCGCTT
CTGGACGACG ACTCGGGCGC GGCCGGAGAG CACCTCGCGC AGGCCCAGGA GCTCGTCCAG
GGCGCGCAGA GGGAGCTGAA CGTCCTGATC CACGAGATGC GCCCCGCCGC GCTCAAGGGC
AAGGGGCTCG CCGCCGCCCT GCGTGACTAC GTCAAGGACT GGTCGCAGAA GGCGGAGATA
CCGGCGGAGT TCCACGTCCG GGGCGAGCGC GAGGCGCCGC TCGAGACCGA GCAGGCGCTC
TTCCGCGTCG CGCAGGAGGC CCTCTCGAAC GTCGCGAGGC ACAGCGGCGC CTCGCGCGCC
GAGGTGGACC TCGAGTACTC GCCGCGCTCC GTGACGCTGC GCGTCGCCGA CGACGGGCGG
GGCTTCGACC CTGCCTTCGG GACCGGCGAC GGCTTCGGGC TGCAGAGCAT GCGCGGGCGC
CTCATGCGCC TCGGCGGGCG CGCGGAGATA GAGAGCGCGC CCGGAGAGGG GACGCGGGTG
GTCGGCGTCT GCCCGCTTCG GGACACGACC GGGACGGTCA CAGAGGGGAA GGTGGGACAG
GCGTGA
|
|---|
| Protein sequence | MKSSAFSLRR LRWKLTLSYT LVTVVALLVL ELLLASGIIA FLNSDLLPRF VGQQLRDEFA
PRLEAPLSRT PPDTARLREE LTWFADNSGI RGADAASPET GLGVRVSADE GALFVVDERR
RLLVSVPRLE GFPEGRPFEA GRVPGLDPLI DRAFDGEENS GRLSSNTDGR VLTVTPIEGD
DGRVNGVLVG TFRMPNLTGP LLITVGASAI LLTVPAGVLG MVFGFVTAWG LTRRLQRVVY
AARAWSRGDF SVVVRDRSKD ELGQLSRELN LMAERLDALV QSRQELATLE ARNQFARDLH
DSVKQQVFAT SLQLAAARAL LDDDSGAAGE HLAQAQELVQ GAQRELNVLI HEMRPAALKG
KGLAAALRDY VKDWSQKAEI PAEFHVRGER EAPLETEQAL FRVAQEALSN VARHSGASRA
EVDLEYSPRS VTLRVADDGR GFDPAFGTGD GFGLQSMRGR LMRLGGRAEI ESAPGEGTRV
VGVCPLRDTT GTVTEGKVGQ A
|
|---|
| |