| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2806 |
|---|
| Symbol | |
|---|
| ID | 4117638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2814913 |
|---|
| End bp | 2816421 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638037577 |
|---|
| Product | thiamine biosynthesis protein |
|---|
| Protein accession | YP_645531 |
|---|
| Protein GI | 108805594 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA CGGCCGAGAG GAAGACGGAG ACGGCCCGGG CGGCCGCGGG TCGCCCGGGG
TTCCGGCGGG GGCTTCTGGT GCGGATGGGG GGTGAGATCT ACACCAAGTC CTCCAGGACG
CGCCGGAGGT TCCTGCGGGT GCTGGTGAAC AACATCTACC TGGCGCTGCG CGAGAGCGGC
ATCAGGGCCT CCATCCGGCC CGAGTGGAGC CGGGTGCTCG TCTACGCGGA CGACCTGCCC
CGGGCGCGGG AGGTGCTCAC CCGGGTGTTC GGGGTCTACG CGGTGGCCGA GGCCCTCGAG
GTGCCCTACG CCTCGCTCGA GGACCTGGTG GAGAAGGTCG CCCCCCTGTT CCGGGAGCAC
GTGGCGGGCA AGACCTTCGC CGTGCGGGCC CGCCGGCGCC GGGCGCCGTT CACCTCCCAG
GACGTGGGGC GCGAGCTGGG GGCAGCCCTG CTGCCCTTCT CGGCCGGCGT AGACCTGGAC
GACCCCGAGG CCGAGGTGAG GCTGGAGGTC GGCAGGGACC GGGCCTTCGT CCTCCTGGAG
GAGTCCAGGG GCCCCGGCGG CTTCCCCGCC GGCACCGGCG GGCGGGCGCT CGCCCTCTTC
TCCGGGGGCT TCGACTCCCC GGTGGCCGCC TGGCGGGTGA TGCGGCGCGG CATCCGGGTC
GACCTGGTGG TCTACGACCT GGGCGGCTGC GGCCAGGTCG GGCAGGCGCT CGCGGTGGCG
CGGGAGCTCG CGCTGCGCTG GGCGCCGGGG CTGGAGGTGC GGGCCAACGT GGTCGACCTC
GCCCCGGTCG TCTCCGCCCT GGTCAGGCGG GTCGACCCGC GGCTGCGCCA GATCCTGCTC
AAGCGCGCCA TGTACCGCGC GGGCTCCATC CTGGCCGGGG AGCTGGGCTT CGAGGCGCTG
GTGACCGGCG AGTCCCTGGG GCAGGTCTCC ACCCAGACCC TGCGCAACCT CGCGGTCGCC
GAGGAGGCGG CGAGCGTGCC CGTGCTCCGG CCGCTGGTGG GCTCCGACAA GCAGGAGATC
ATCGAGGCCG CCCGCAGCAT CGGCACCCAC GACGTCTCGG CGCTCGTCAA GGAGCACTGC
TCCATCGCCA CCGGGCCGGT GGAGACCTGG GCCGACCCCG AGGAGGTGCT CACCGCCGAG
AGCGGCCTCG ACCAGGACGT GGACGAGGCC TGGCTCCGCC GGGCGGTGGA GAACCGCCGG
GTCATACGCC TGAAGAGCTG GGACCCCGCC GGGGAGGAGA GCCCGGGCTA CGTGGTGGAC
CGGGTGCCCG AGGGGGCCGT GGTGGTGGAC ATCCGGGAGC CCGGGGAGGG CGAGCCCGTA
GGCGATCTCC GGCTGCCCTT CTCGCGGGCC ATGGAGTCCC TCGAGGAGCT CGACCCGTCG
CGCGAGTACC TGCTCGTGTG CGCCAGCGGG CGGCGCTCGG AGCTTTTGGC GCGCGAGATG
ATCGGCCGCG GCTACAGGGC CTACAGCCTG GAGGGCGGGG CCGGGAGGCT GGCCGCCGCC
CCCTCCTAG
|
|---|
| Protein sequence | MTETAERKTE TARAAAGRPG FRRGLLVRMG GEIYTKSSRT RRRFLRVLVN NIYLALRESG
IRASIRPEWS RVLVYADDLP RAREVLTRVF GVYAVAEALE VPYASLEDLV EKVAPLFREH
VAGKTFAVRA RRRRAPFTSQ DVGRELGAAL LPFSAGVDLD DPEAEVRLEV GRDRAFVLLE
ESRGPGGFPA GTGGRALALF SGGFDSPVAA WRVMRRGIRV DLVVYDLGGC GQVGQALAVA
RELALRWAPG LEVRANVVDL APVVSALVRR VDPRLRQILL KRAMYRAGSI LAGELGFEAL
VTGESLGQVS TQTLRNLAVA EEAASVPVLR PLVGSDKQEI IEAARSIGTH DVSALVKEHC
SIATGPVETW ADPEEVLTAE SGLDQDVDEA WLRRAVENRR VIRLKSWDPA GEESPGYVVD
RVPEGAVVVD IREPGEGEPV GDLRLPFSRA MESLEELDPS REYLLVCASG RRSELLAREM
IGRGYRAYSL EGGAGRLAAA PS
|
|---|
| |