Gene Rxyl_2800 details

Gene Information

• Locus tag: Rxyl_2800
• ID: 4117632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 2808824
• End bp: 2810716
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638037571
• Product: amino acid permease-associated region
• Protein accession: YP_645525
• Protein GI: 108805588
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0531] Amino acid transporters

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGACA GGGTAAGGTA CTTCGAAGAT GCGGACCGCA AGCTGAAGCG CGAGCTGGGC 
TTCCAGCAGC TCTTCTTTCT CTCCTTCGGG AGCATCATCG GGAGCGGCTG GCTGTTCGCC 
GCCCTGGCGG GCGCGGCCAT CGCGGGGCCG GCGGCGCTGC TGTCCTGGGT CATCGGCGCG 
GTCTTGCTGA TATTCGTCGG TCTCAACTAC GCCGAGACCT CGTGCATGAT CCCGCGCAGC 
GGCTCGGTGG TGCGCTACCC GCACCTCACG CACGGGGGCT TCCTGGGCTT CATCATGAGC 
TGGTCGTTCA TGCTGGGCAC GGTGACGGTC ACCGCCATCG AGGCCCTGGC CGTGGTGCAG 
TACGCCTCCG TCTACGTGCG GGACTGGACG GGCGTAGAGC TGACCACCGT CCGGGAGGGG 
GTCGCCGTGC TCACCGGGGC GGGGATCGTG CTGGCCGTCC TGCTCATGAT CCTCTTCTTC 
GTCGTCAACA TCTTCGGCGT GAGGTTCTTC GGGGAGTTCA ACCGGTGGGT CAGCTGGTGG 
AAGACCATCA TCCCCGTTCT TACGTTCGTT CTGCTGTTCT TCGCCTTCCG GGCCTCCAAC 
TTCACCGAGT TCGGGGGCTT CGCCCCGCGC GGCTTCGACA ACGTGTTCAA CGCCGTAGCC 
ACCGCCGGCA TCGTCTTCGC CTACTTCGGG TTCCGGCAGG GGCTGGACTT CGGCGGCGAG 
GCGCGCAACC CGCAGAGGGA CATCCCGGCG GCCACCATAC TCTCCTTGGC TGCGGCCGGC 
GCGATCTACT TCTTCCTCCA GCTCGCGTTT CTGGGGGCGC TGGACTGGGA CGCTGCGGGG 
GTGAATCCCG GCGACTGGGC CGCGCTGAAC GACAGCGAGT GGGCGAGCCA GCCCCTCTAC 
TACGCGCTCG AGTCAAACGG CGGCGTGCTC GTGCTGGGCG CCGCCTCCAT ACTCTCGATC 
TTCGCGGTGG TCCTGCTCGT GGACGCCGCC ATCTCGCCGG CGGGGACCGG CTGGATCTAC 
ATGGGCTCCT CCGCCCGGGT GCTCTACGGG ATGGCGATGC ACGACGACCT GCCCCGCTGG 
CTGACCAGGG TCGAGGACCG CACCGGGATA CCCATGGTGG CCCTCGTCGC CGCCCTGGTG 
GTCGGTTGCA TCTTCTTCCT GCCGTTCCCG GGCTGGTACA TCCTGGTGGG CTTCATAACC 
GGGGCCCTGG TGTTCACCTT CGTCATGGGC GGGGTCCAGG TCCAGGTCAT GCGCCGCACC 
GCCCCGGATC TTCCCCGCCC GTACTGGCTC AAGGGCGCCG CCGTCTTCTC CCCCCTGGGC 
TTTCTGGCGG GCAGCATGAT CTTCTACTGG GCCGGTTACG AGACCTTGAG GGGCGTGGTG 
GCCGCGGTCC TCATCGGGCT GGCGCTCTAC GCCTTCTTCC AGGGGCCGCG CCGGAACCGG 
ATAAGCTACC CCGTGGGGCT CGCCCTGGGC ATCCCGTTCG CCGTGGTCTG GCTCGCCACC 
CAGTACTTCG GGCCGGCCCC CCTCGGCAAC GGCGCGCTCC CCTTCTTCGC CTACTGGGTC 
CTCTGCGTGG CGGAGGTCGT CGGCTTCGTC GGGCTGGTGT GGCTGTTTGC CAGCGACCGG 
GGCCGGCGCG AGGTGAAGGC TGCGTGGTGG GTGCTGTTTC TCGCGCTGGC GCTCTACCTC 
CTCTCCTACT ACGGGACCTA CGGTCCTCTG GAGAACCCGC CGGTGCCCTT CCCCTGGGAC 
AACCTGATCG CGCTGGCCGT CGGGCTCGTC GCCTACTACT GGGGCGTCGC CAGCGGCTAT 
GAGACCGAGG AGATGCGCTC CATAAACGAG TCCGGCACCG GTCTGGTCCC CACCTCGGAG 
GAAGAGGAGT CCCTCGGCGC CCTCAGGGAT TGA 

 

Protein sequence

MEDRVRYFED ADRKLKRELG FQQLFFLSFG SIIGSGWLFA ALAGAAIAGP AALLSWVIGA 
VLLIFVGLNY AETSCMIPRS GSVVRYPHLT HGGFLGFIMS WSFMLGTVTV TAIEALAVVQ 
YASVYVRDWT GVELTTVREG VAVLTGAGIV LAVLLMILFF VVNIFGVRFF GEFNRWVSWW 
KTIIPVLTFV LLFFAFRASN FTEFGGFAPR GFDNVFNAVA TAGIVFAYFG FRQGLDFGGE 
ARNPQRDIPA ATILSLAAAG AIYFFLQLAF LGALDWDAAG VNPGDWAALN DSEWASQPLY 
YALESNGGVL VLGAASILSI FAVVLLVDAA ISPAGTGWIY MGSSARVLYG MAMHDDLPRW 
LTRVEDRTGI PMVALVAALV VGCIFFLPFP GWYILVGFIT GALVFTFVMG GVQVQVMRRT 
APDLPRPYWL KGAAVFSPLG FLAGSMIFYW AGYETLRGVV AAVLIGLALY AFFQGPRRNR 
ISYPVGLALG IPFAVVWLAT QYFGPAPLGN GALPFFAYWV LCVAEVVGFV GLVWLFASDR 
GRREVKAAWW VLFLALALYL LSYYGTYGPL ENPPVPFPWD NLIALAVGLV AYYWGVASGY 
ETEEMRSINE SGTGLVPTSE EEESLGALRD