Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2797 |
Symbol | |
ID | 4117629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2805847 |
End bp | 2807295 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037568 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_645522 |
Protein GI | 108805585 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCGGTG GCGATCCTTG CGACAGGGGC ATGACCTCCC CGCGGACGGG CGGCGCGGGA CGGGGCTGGG TCGTCCTCTC CGCGGTCTCC GTGGGGACCT TCATGGCGAC GCTGAACACC AGCATCGTCA ACATCTCCCT GCCGGTCATC GCCGGGGACT TCGGGGTGGG GGTCTCGGAG GTGGAGTGGG TGGTGATCTC GTACCTGCTG GCCACCGGCA CCCTGCTGCT GACGTTCGGC CGCCTCGGCG AGGTGGCCGG CTACCGCAGG GTCTACCTGG CGGGGCTCGC CGTGTTTGCC GCCGCCGGTG CCCTCTGCGG CCTCTCCGGG GGGCTGGGGA GCATGGTCCT CCTGCGCGCG CTGCAGGGGG TGGGCGCCGC CGCGGTGCAG GCCGTGGGGC CGGCCATCGT CACGGCGGCC TTCCCCCCTT CTCGCCTGGG CAGGGCCCTG GGGGTGAACG CCATGAGCGT CTCCTTCGGC CTGGCGCTCG GCCCCACGCT CGGGGGCCTC GTCGCCGAGT GGCTCTCGTG GCGTTGGATC TTCTTCCTCA ACCTTCCCCT GGGGCTCGTG GGGCTGCCGT GGTCGTGGCG GGTGCTCCCC CGTTGCGGCC GGGGAGAGGG CCAGCGCTTC GATCCCGCCG GGGCCCTGCT CGCGGGCGGG ATGCTCCTGT GCCTGCTGCT GGCCCTCGCC GAGGGCGGGG GCTGGGGCTG GCTGAGCCCC CTCACGCTGG GCCTGTTCGC CGCGGCCGCC GCCCTCGCCG CGGCCTTCGT CCTCGCGGAG CTGCGCTCCC CGCAGCCCCT CTTCGACCTG CGGCTCTTCG CCATCCGGGC CTTCTCGGCG GGCAACGCGA GCCTGCTGGT GACCTTCGTC GCGCTGCTCT CGGCCACCTT CCTCATGCCG TTCTTCCTGC AGCGGGGGCA GGGGCTCTCC GCCCTGCAGG CCGGGCTGCT CATGACCCCC CTCTCGCTCA CCACGCTGGT GGTCTCCCCC TTCAGCGGCG CGCTCTCCGA CCGGATCGGC AGCCGCCTGC TGGCCAGCTC GGGGCTGGCC TGCGCCGCGC TCGGGCTGTT GTTGCTCACC CGGCTGGACG CGGGCTCCGG GGGCCTCGAC GTGGTGTGGC GGCTCGTGGT GATCGGCTTC GGCATGGGCC TCTTCAACAG CCCGAACCAG AGCTCCATCC TCGGCTCGGT GCCCCGCCTC CGGCTCGGGA CGGCCTCGGG CATGATCGCC CAGATGCGCA TCACGGGCCA GATGCTGGGG GTGGCGGCGA GCAGCGCCAT CCTCGCCTCC CGCCTGCAGC ACCACCTGCG CGAACTCCCC CCTGAGGCCC CCCGCAGGGA GGCCCTGATC CTGTCCATAC ACGACGCCTT CTACTTCGCC GCGGCGGTCT GCGTGCTGGG GGTGGCGGCG AGCCTGGTGC GCGGCCGCCG CCCAGGCGCG AAGGGCTGA
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Protein sequence | MPGGDPCDRG MTSPRTGGAG RGWVVLSAVS VGTFMATLNT SIVNISLPVI AGDFGVGVSE VEWVVISYLL ATGTLLLTFG RLGEVAGYRR VYLAGLAVFA AAGALCGLSG GLGSMVLLRA LQGVGAAAVQ AVGPAIVTAA FPPSRLGRAL GVNAMSVSFG LALGPTLGGL VAEWLSWRWI FFLNLPLGLV GLPWSWRVLP RCGRGEGQRF DPAGALLAGG MLLCLLLALA EGGGWGWLSP LTLGLFAAAA ALAAAFVLAE LRSPQPLFDL RLFAIRAFSA GNASLLVTFV ALLSATFLMP FFLQRGQGLS ALQAGLLMTP LSLTTLVVSP FSGALSDRIG SRLLASSGLA CAALGLLLLT RLDAGSGGLD VVWRLVVIGF GMGLFNSPNQ SSILGSVPRL RLGTASGMIA QMRITGQMLG VAASSAILAS RLQHHLRELP PEAPRREALI LSIHDAFYFA AAVCVLGVAA SLVRGRRPGA KG
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