Gene Rxyl_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2797 
Symbol 
ID4117629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2805847 
End bp2807295 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content74% 
IMG OID638037568 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_645522 
Protein GI108805585 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGGTG GCGATCCTTG CGACAGGGGC ATGACCTCCC CGCGGACGGG CGGCGCGGGA 
CGGGGCTGGG TCGTCCTCTC CGCGGTCTCC GTGGGGACCT TCATGGCGAC GCTGAACACC
AGCATCGTCA ACATCTCCCT GCCGGTCATC GCCGGGGACT TCGGGGTGGG GGTCTCGGAG
GTGGAGTGGG TGGTGATCTC GTACCTGCTG GCCACCGGCA CCCTGCTGCT GACGTTCGGC
CGCCTCGGCG AGGTGGCCGG CTACCGCAGG GTCTACCTGG CGGGGCTCGC CGTGTTTGCC
GCCGCCGGTG CCCTCTGCGG CCTCTCCGGG GGGCTGGGGA GCATGGTCCT CCTGCGCGCG
CTGCAGGGGG TGGGCGCCGC CGCGGTGCAG GCCGTGGGGC CGGCCATCGT CACGGCGGCC
TTCCCCCCTT CTCGCCTGGG CAGGGCCCTG GGGGTGAACG CCATGAGCGT CTCCTTCGGC
CTGGCGCTCG GCCCCACGCT CGGGGGCCTC GTCGCCGAGT GGCTCTCGTG GCGTTGGATC
TTCTTCCTCA ACCTTCCCCT GGGGCTCGTG GGGCTGCCGT GGTCGTGGCG GGTGCTCCCC
CGTTGCGGCC GGGGAGAGGG CCAGCGCTTC GATCCCGCCG GGGCCCTGCT CGCGGGCGGG
ATGCTCCTGT GCCTGCTGCT GGCCCTCGCC GAGGGCGGGG GCTGGGGCTG GCTGAGCCCC
CTCACGCTGG GCCTGTTCGC CGCGGCCGCC GCCCTCGCCG CGGCCTTCGT CCTCGCGGAG
CTGCGCTCCC CGCAGCCCCT CTTCGACCTG CGGCTCTTCG CCATCCGGGC CTTCTCGGCG
GGCAACGCGA GCCTGCTGGT GACCTTCGTC GCGCTGCTCT CGGCCACCTT CCTCATGCCG
TTCTTCCTGC AGCGGGGGCA GGGGCTCTCC GCCCTGCAGG CCGGGCTGCT CATGACCCCC
CTCTCGCTCA CCACGCTGGT GGTCTCCCCC TTCAGCGGCG CGCTCTCCGA CCGGATCGGC
AGCCGCCTGC TGGCCAGCTC GGGGCTGGCC TGCGCCGCGC TCGGGCTGTT GTTGCTCACC
CGGCTGGACG CGGGCTCCGG GGGCCTCGAC GTGGTGTGGC GGCTCGTGGT GATCGGCTTC
GGCATGGGCC TCTTCAACAG CCCGAACCAG AGCTCCATCC TCGGCTCGGT GCCCCGCCTC
CGGCTCGGGA CGGCCTCGGG CATGATCGCC CAGATGCGCA TCACGGGCCA GATGCTGGGG
GTGGCGGCGA GCAGCGCCAT CCTCGCCTCC CGCCTGCAGC ACCACCTGCG CGAACTCCCC
CCTGAGGCCC CCCGCAGGGA GGCCCTGATC CTGTCCATAC ACGACGCCTT CTACTTCGCC
GCGGCGGTCT GCGTGCTGGG GGTGGCGGCG AGCCTGGTGC GCGGCCGCCG CCCAGGCGCG
AAGGGCTGA
 
Protein sequence
MPGGDPCDRG MTSPRTGGAG RGWVVLSAVS VGTFMATLNT SIVNISLPVI AGDFGVGVSE 
VEWVVISYLL ATGTLLLTFG RLGEVAGYRR VYLAGLAVFA AAGALCGLSG GLGSMVLLRA
LQGVGAAAVQ AVGPAIVTAA FPPSRLGRAL GVNAMSVSFG LALGPTLGGL VAEWLSWRWI
FFLNLPLGLV GLPWSWRVLP RCGRGEGQRF DPAGALLAGG MLLCLLLALA EGGGWGWLSP
LTLGLFAAAA ALAAAFVLAE LRSPQPLFDL RLFAIRAFSA GNASLLVTFV ALLSATFLMP
FFLQRGQGLS ALQAGLLMTP LSLTTLVVSP FSGALSDRIG SRLLASSGLA CAALGLLLLT
RLDAGSGGLD VVWRLVVIGF GMGLFNSPNQ SSILGSVPRL RLGTASGMIA QMRITGQMLG
VAASSAILAS RLQHHLRELP PEAPRREALI LSIHDAFYFA AAVCVLGVAA SLVRGRRPGA
KG