Gene Rxyl_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2784 
Symbol 
ID4117617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp2797124 
End bp2797795 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID638037556 
ProductTenA family transcription regulator 
Protein accessionYP_645510 
Protein GI108805573 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.349831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGAGG CCGGCTTCAC CGGAGAGCTC TGGCGGTCCA TAGAGGGGAT CTACGCCGCC 
ATCCTCGACC ACCCCTTTAT CCGGGGGCTC ACCGACGGCA GCCTCCCCCG GGACCGCTTC 
CGGCACTACG TGGTCCAGGA CGCCCTCTAC CTGCGCGACT ACGCGCGGGC GCTGAGCCTC 
GCCGGGGTCC GCTCGCCGGA CGAGGGCGCG CTGGTGATGT TCGACGAGCA CGCGGTGGGG 
GCCATAAAGG TCGAGCGCAG CCTGCACGAG AGCTTCTTCA GGGACTTCGG GATCACGGAG 
GAGGAGGTCC GGCGCACCCC GATGGCCCCG ACCAACCTGG CCTACACCAG CTACCTGCTG 
CGGGTGGCCT CCCTGGGCGA CTACCACGAG GTGCTCGGGG CGGTGCTGCC GTGCTACTGG 
ATCTACGCCG AGGTCGGTCG GGCCCTGCTG GAGCGCGGCT CGCCCGACGA GCTGTACGCG 
CGCTGGATCG ACACCTACGG CGGCGAGGAG TTCAACGAGC TGGTGCGGGC GGTCCTGGAG 
CTCACGGACC GGGCCTGCGC CGGCCTGAAC CCGGACCAGC GGGCCGCCGC CACCGAGGCC 
TTCGTGACCA CCAGCCGCTA CGAGTGGATG TTCTGGAACA TGGGCTGGAC CCTGGAGGGC 
TGGCCGGTGT AG
 
Protein sequence
MSEAGFTGEL WRSIEGIYAA ILDHPFIRGL TDGSLPRDRF RHYVVQDALY LRDYARALSL 
AGVRSPDEGA LVMFDEHAVG AIKVERSLHE SFFRDFGITE EEVRRTPMAP TNLAYTSYLL 
RVASLGDYHE VLGAVLPCYW IYAEVGRALL ERGSPDELYA RWIDTYGGEE FNELVRAVLE 
LTDRACAGLN PDQRAAATEA FVTTSRYEWM FWNMGWTLEG WPV