Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2776 |
Symbol | |
ID | 4117317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2788230 |
End bp | 2788769 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638037548 |
Product | HNH endonuclease |
Protein accession | YP_645502 |
Protein GI | 108805565 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.228269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCCTCA ATGCCAGCTA CGAGCCCGTG GCGCTGGTTC CGGTCAAGCG GGCCATCGTT CTGGTTGTCA CCGAGAAGGC CGAGATCGTC GAGGCCAACC TTGAGCGGCG CTTCCGCTCC GAGAAGGCCG AGTACCCCTA CCCGCTCGTC ATCCGGCTCG TGAAGTACGT CGAGATCCCG CGGCGGCTGC GGCGGCACGT CACCAACACC ATCCTCTTCG CCCGCGACGG CTACCGCTGC CAGTACTGCG GGCGGCACAA GAGCGAGCTG GGCCGGCGGG AGTGCCTGAC CCGGGACCAC GTCAAGCCCC TCTCGCGCGG CGGGGGCAAC AGCTGGGACA ACGTGGTCAC CGCCTGCACG CGGTGCAACG CCCGCAAGGG CGACCGGCTC CCGATGGAGT GCGGGATGTA CCCCAGGAGC ACCCCCAAGG AGCCGCGCTA CGTGGTGATG GTGTGGTACT CGCGGGGGCT CAACGAGATC CAACGCCGCT ACGTCGAGCA GTTCTACGGC GAGCCGCTCG CCGGGGAGGC CACCGCCTGA
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Protein sequence | MTLNASYEPV ALVPVKRAIV LVVTEKAEIV EANLERRFRS EKAEYPYPLV IRLVKYVEIP RRLRRHVTNT ILFARDGYRC QYCGRHKSEL GRRECLTRDH VKPLSRGGGN SWDNVVTACT RCNARKGDRL PMECGMYPRS TPKEPRYVVM VWYSRGLNEI QRRYVEQFYG EPLAGEATA
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