| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2774 |
|---|
| Symbol | |
|---|
| ID | 4117315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2785938 |
|---|
| End bp | 2787173 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 638037546 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_645500 |
|---|
| Protein GI | 108805563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGGG GGTTCGCCTT CCGGCCCACC TCCCGGGGCT GGCAGGCCCT CGCCGCCGGG
GCGGCGGTGC TCGCGGTCGC CCGCCTCGTA GGCACCACGC AGCTTCACCA GCTGGCCTAC
CTGCTCCTCC TGCTCGTCGC CGCCGCGCTC GCGCTCGGTG CGGCGGGCTT AGCGGGGCTG
GGCTTCGAGC GGCGCCTTCC TGAGGGGGGC AGGATCACGG CCGGCCGCCC CGCCGGGGTG
GAGCTCGTGC TCCACAACCG CTCCCGCCTG CTGTGGACCT CCCGGCTCGA GGTCGAGGAT
GTGCTCGCCC GCCGGGAGAG CGCCGCCCTG CCGCCGCTTC CCCCCGGCCG GAGGCGGCGG
GCGCGCCTCT CCGCGACCTT CCCCCGCCGG GGCGTCTACC GGCTCGGGCC CGCCGTCGTC
CGCGGCGTCG ACCCCTTCGG GCTGCTCGTC TTCTCGCGCG CCTTTCGGGG GGAGGACGAG
GTCGTGGTCT ACCCGCGGGT GCACCCGCTG CGGGGCTTCC CCGTCCGCGG CGGGGAGGCG
CAGGCCGGGA GCCGGGGCTC CCGCGGCAGG CGCGGCGAGG AGTTCGCCGG GCTGAGGGAG
TACCGGCGCG GCGACGACCG GCGGCACATC CACTGGAAGA GCCTGGCCAG GACCGGGGAA
CTCTTCGTGA AGGAGTTCGC GCTGCACGCC CCCCGGAGCT ACACGGTCGC GCTCGACCTG
CGGCGCGGCG GCTTCAGGAG CCTGGAGGCG GCGGTGGAGG ACGCCGTCTC GGCGGCCGCC
TCCATCCTCG CCCACCTGAG GGAGGAGGGG CTCGGCTTCC GCCTGCTGTG CACGGACCGG
GCCGGCTCGG GCACGGAGGC CGGGGAGGGC CACGCGGCCT ACTGGGAGGC CATGAGGGTC
CTCGCCGGGG TGCGGGCCGA CGGGGAGGCG GGGCTCGGGG AGGCGCTGGA CGGGGAGGAC
CGGGGCTCGT TCGGGGACGG GGTCATCCTC GTCTGCCGCC GCGAGGAGGA GGGGCTGCGG
GCGCGCGTCC GGCGGCTCAG GGAGGCGGGG CTGGCCGTGG TGGCCGTCCT CGTCGCCGAG
CACACCTACC GCGGCGGGGC CGCCCAGCCC GGGCCCGAGG CCCGCTTCTC GAGCTTCGCC
TCGGAGCTCG AGGCCGCCGG GGCCCGGGTG CTCGTGGTGC GCCACCCGGA GGGCGTCGCC
GGGCTCGGCG GCGGGCCGGC GCGGGGGGCC GTATGA
|
|---|
| Protein sequence | MLRGFAFRPT SRGWQALAAG AAVLAVARLV GTTQLHQLAY LLLLLVAAAL ALGAAGLAGL
GFERRLPEGG RITAGRPAGV ELVLHNRSRL LWTSRLEVED VLARRESAAL PPLPPGRRRR
ARLSATFPRR GVYRLGPAVV RGVDPFGLLV FSRAFRGEDE VVVYPRVHPL RGFPVRGGEA
QAGSRGSRGR RGEEFAGLRE YRRGDDRRHI HWKSLARTGE LFVKEFALHA PRSYTVALDL
RRGGFRSLEA AVEDAVSAAA SILAHLREEG LGFRLLCTDR AGSGTEAGEG HAAYWEAMRV
LAGVRADGEA GLGEALDGED RGSFGDGVIL VCRREEEGLR ARVRRLREAG LAVVAVLVAE
HTYRGGAAQP GPEARFSSFA SELEAAGARV LVVRHPEGVA GLGGGPARGA V
|
|---|
| |