| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2756 |
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| Symbol | |
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| ID | 4115274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2767999 |
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| End bp | 2769663 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 638037529 |
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| Product | prenyltransferase/squalene oxidase |
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| Protein accession | YP_645483 |
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| Protein GI | 108805546 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAGAC AGACGCGCAA CCTGACGCGC CGGGAGCCGG CGGCGGAGGC CGAGGAGCGG
GGCTTCCGGC TACTCGACGC GCACCGCCGG GCGGACTCCT CGTGGGTCGG GGAGCTCTCC
TCCTCGGCCC TGGCGACGGC CATGTCCGCC CTCGCCCTGC GCCTGCTGGG GCACCCGGCG
GAGAGCGGCC CCGTCGCCGG GGGGCTCGCC TGGCTCGCGG CGACCCGGAA CCCCGACGGC
GGCTGGGGCG ACGCCCCCGG GGAGCCGAGC AACATGAACG CCACCAGCAT CGCCGCCGCG
GCGCTGGCGC GCTGCGCGCC GCGGCGCTAC CGGGAGGAGG TCGCCGGGGG CAGGCGGTGG
GTCGAGGAGC ACGGGGGCTT CGCGGCGCTC AACGACCCGC GAACCACGAC CCTCAGCGGC
CCCGGACGCA CCCTGTGGGC CCTCGCGGGG CTCGTCCCGC CGGAGAGGGT CCGCAAGCTG
CCCACCGAGA TGATCCTGCT GCCCCGCAGG ATCCGGCGCA CCGTCTCCAC CACCTTCCCC
GCCTTCCTGA GCCTCTCGCT GCTGCACGAG CGCTTCCGGC CCTCCCCCCG GTGGCGCCGC
CCCCTCCGGC GGAGGGCCGA GCGGGAGGCG CTAGCCTGGC TCCGCCGGGC GCAGGGGCCG
AACGGCTCCT ACGAGGAGTC CGCCTTCCTC ACCTCGCTCA TAGCGGCGGC GCTCACCGCG
GCGGGGGCGG AGGGAGGGGA CATCGTCCGC CGGGCGCTGC CCTTCGTGCT CCGGTCCCGG
CGGCCCGACG GCTCCTGGCC CATAGACCGC GACCTGGAGA ACTTCGACAC CACCCAGGCC
ATCCTGGCCC ACCACGAGGC CGGCCGCCCC CTGAGGGAGG CGGGGAGGGT CCGGGAGTGG
CTGCTGGACA ACCAGTTCCG CAGGCCCTTC TTCCCCACCT CCTCCCCTCC CGGCGGCTGG
GCGTGGGCCT ACCCGGCGGG CTGGCCCGAC ACCGACGACA CCGCCTGCGC CCTCCGGTCG
CTGCGGCTGC TCGGGGTGCC GGCCGGGCAC CCCTCCATCA GGCTGGGGCT GCGGTGGCTC
TACCGGATGC AGAACCGCGA CGGCTCCTGG CCCACCTTCG TCCGGGGCTC CAGGATGCCC
TTCGACCACG GCTGCCCGTA CATCACCTCC CAGGTACTCT CGGCCCTCGC GCTGATGGGC
CCCGAGGCGC GCCGGGGCGC GCCGCTGCGG CGGGCGCTCG CCTACCTGCG CCGCGCCCAG
CGCCCCGACG GGAGCCTGGG CTCGCTCTGG TTCCGGCCCC ACACCCGGGG CACGGCGGCC
GCCGTAGAGG CGTTCTCCGA CCTCGGGCTC TCCGGCGACC CGCTGGTGGG GCGGGCGGCG
CGGTGGCTGG CGGAGCACCA GAACCCCGAC GGCGGCTGGG GCGACGGCCA CGGGGCGCCC
TCCACCGCCG AGGAGACCGC CTGGGCGAGC GCGGCGCTGC TCAGGCTCGG GGGCGGGGAG
GCCGCCCGGA AGGGCGTCCG GTGGCTGGTG GAGCACCAGG ACCCCGGCGG CTGGAAGCCC
GCGGTCATCG GGCTGTACTA CGCCTCCCTC TCCTACTCCG ACACCTTCTA CGCCCTGAGC
TACCCGCTCG TGGCGCTCGC CCGCCACCGG AGGCTCTCGC GGTGA
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| Protein sequence | MGRQTRNLTR REPAAEAEER GFRLLDAHRR ADSSWVGELS SSALATAMSA LALRLLGHPA
ESGPVAGGLA WLAATRNPDG GWGDAPGEPS NMNATSIAAA ALARCAPRRY REEVAGGRRW
VEEHGGFAAL NDPRTTTLSG PGRTLWALAG LVPPERVRKL PTEMILLPRR IRRTVSTTFP
AFLSLSLLHE RFRPSPRWRR PLRRRAEREA LAWLRRAQGP NGSYEESAFL TSLIAAALTA
AGAEGGDIVR RALPFVLRSR RPDGSWPIDR DLENFDTTQA ILAHHEAGRP LREAGRVREW
LLDNQFRRPF FPTSSPPGGW AWAYPAGWPD TDDTACALRS LRLLGVPAGH PSIRLGLRWL
YRMQNRDGSW PTFVRGSRMP FDHGCPYITS QVLSALALMG PEARRGAPLR RALAYLRRAQ
RPDGSLGSLW FRPHTRGTAA AVEAFSDLGL SGDPLVGRAA RWLAEHQNPD GGWGDGHGAP
STAEETAWAS AALLRLGGGE AARKGVRWLV EHQDPGGWKP AVIGLYYASL SYSDTFYALS
YPLVALARHR RLSR
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