| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2754 |
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| Symbol | |
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| ID | 4115272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2765065 |
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| End bp | 2766888 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638037527 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_645481 |
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| Protein GI | 108805544 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.285635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGGG AGAACCAGCC CTATCCCCCC ATCGCCGACT ACGCCCTCAT CGGGGACAGC
AACTCCGCCG CGCTCGTCTC CCGCTCCGGC TCCGTGGACT GGTGCTGCAT CCGGCGGCTG
GACGCCGGGA GCTGCTTCGG GCGGCTGCTC GACTGGGAGA AGGGCGGCTA CTGCGCCGTC
ACCCCCGCGG GGGAGGAGTG GGACGTCTCC CGGCGCTACG TGGAGAGCTC GCTCGTCCTG
GAGAGCACCT TCAAGGTCCC CGGGGGGGAG GCGCGGCTCT ACGACTTCTT CGCCATGCCC
TCCAGCCGCG AGGAGTACCC CTACCGCCAG CTCTTCCGGG TGCTGGAGGG GGTCCGGGGG
CACGCCGAGT TCTCCGTCGG GGTCTTCCCC CGCTTCGACT ACGGGGAGCT CGACCCCTGG
CTCCGGCAGG AGGGCGTGCG GCTCTACAGC GCCCTCGGGG GCGACGACGG GCTCCTGATC
TACTTCGACG AGGAGCTCAT GAAGGCCGGC GACCACGGCC TCGAGGCCAC CGTGACCGTG
CACGCCGGGG AGCGGGTGCG CCTGATGGTC ATGTCCGTGC CCCCGGAGCG GCTCGACCTC
CGCTCGCCGG AGGTGCCCGA GCCAGAGGAG ATAGACCGGC GGCTGGAGGA GACGCTCGGC
TGGTGGCGCG GGTGGACCTC CCGCTTCCGC TACCGGGGCA TCGGCGGCCC CGGCGTGCTC
CGCTCGGCCA CCGTCATAAA GGGGCTCATG AACGACCTCA CCGGGGCGGT CGCCGCGGCG
GCCACCACCT CCCTCCCCGA GCGCCCCGGC GGCCCCCTCA ACTGGGACTA CCGGTACAGC
TGGATCCGGG ACTCCTTCTT CGCCGTCCGC TCGCTCGCCG AGATCGGCTT CGAAGAGGAG
GCCGACCGCT TCCGCAGGTT CATCGAGCGG AGCGCGGCGG GCAGCGCAGA CCAGCTGCAG
ATCATGTACG GCATGGGCGG CGAGAGGCGC CTGAACGAGT TCGTCCTGGA GAACCTGGAG
GGCTACCGGG GCGCGCGCCC CGTGCGGGTG GGCAACGCCG CCGCCGGCCA GCTCCAGCTG
GACGTCTACG GCGAGCTCCT GGAGCTCGCC TGGCGCTGGC ACCGGCGGGG AAACTCCCCG
GACGACGACT ACTGGCGCTT TCTGCTGGAC ATCGTGGACG CCGCCGCCGA GCGCTGGCGG
GAGCCGGACA GCGGGATCTG GGAGGTCCGG GACGACCCGC AGCACTTCGT GCACTCCAAG
GTGATGTGCT GGGCCGCCCT GGATAAGGGG CTCCGGCTGG CGGAGGAGTG CATGCGGCGG
GCCCCGGAGC GCCGGTGGGC GAAGGCTCGC CAGCAGATCC GGGAGGCCGT GGAGAGCGAG
GGCTACGACG CCGAGCGCGG CGTCTTCACC CGCAGCTTCG AAAGCCGGGA GCTGGACGCC
GCCCTCCTCC TGCTGCCCCG CGTGGGCTTC GTGGAGCACG CCGACGAGCG GATGGTGCGC
ACCGTCCAGG CCGTGCGCGA GGAGCTGGAG CAGGACGGCC TGCTCCTCCG CTACCGCCGG
AAGGAGGGCG AGGAGGAGGG GGCGTTTCTG GCCTGCTCCT TCTGGCTCGT CGAGTGCCTG
GCCCACCAGG GCCGCCTCGA GGAGGCCAGG GAGCTCTTCG ACCGGGCGCT GGTCGCCGGC
AACGACCTCG GCCTCTTCTC CGAGGAGTAC GACCCCGCCT CCGGCGAGGC CCTGGGCAAC
TTCCCCCAGG CCCTCACCCA CCTCTCCCAC ATCGAGGCCG CCATAGCCAT CTCCCGCCAC
CTGCCCGCCG GGGCCGGGGC TTAA
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| Protein sequence | MPRENQPYPP IADYALIGDS NSAALVSRSG SVDWCCIRRL DAGSCFGRLL DWEKGGYCAV
TPAGEEWDVS RRYVESSLVL ESTFKVPGGE ARLYDFFAMP SSREEYPYRQ LFRVLEGVRG
HAEFSVGVFP RFDYGELDPW LRQEGVRLYS ALGGDDGLLI YFDEELMKAG DHGLEATVTV
HAGERVRLMV MSVPPERLDL RSPEVPEPEE IDRRLEETLG WWRGWTSRFR YRGIGGPGVL
RSATVIKGLM NDLTGAVAAA ATTSLPERPG GPLNWDYRYS WIRDSFFAVR SLAEIGFEEE
ADRFRRFIER SAAGSADQLQ IMYGMGGERR LNEFVLENLE GYRGARPVRV GNAAAGQLQL
DVYGELLELA WRWHRRGNSP DDDYWRFLLD IVDAAAERWR EPDSGIWEVR DDPQHFVHSK
VMCWAALDKG LRLAEECMRR APERRWAKAR QQIREAVESE GYDAERGVFT RSFESRELDA
ALLLLPRVGF VEHADERMVR TVQAVREELE QDGLLLRYRR KEGEEEGAFL ACSFWLVECL
AHQGRLEEAR ELFDRALVAG NDLGLFSEEY DPASGEALGN FPQALTHLSH IEAAIAISRH
LPAGAGA
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