| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2718 |
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| Symbol | |
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| ID | 4116208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2729257 |
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| End bp | 2731041 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037491 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_645445 |
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| Protein GI | 108805508 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA GCACCGGACA GTTCATCCTC GAGCGCCTCG CCGACTGGGG GGTGAGGAGG
ATCTACGGCT ACCCCGGCGA CGGCATAAAC GGGCTCCTCG GGGCCTTCCA CGAGGTCGGG
GACCGGGTAG AGTTCACCCA GACCGCCCAC GAGGAGATCG CCGCCTTCGC CGCCACGGCC
CACGCCAAGT TCACCGGCGA GGTGGGGGTG TGCATGGGCA CCTCGGGGCC CGGCGCGATC
CACCTCCTCA ACGGCCTCTA CGACGCCCGG CTGGACCACC AGCCCGTGGT GGCCATCGTC
GGCCAGCAGA AGCGGATGGG GCTGGGGAGC AACTACCAGC AGGAGGTGGA CCTCGTCAGC
CTCTACAAGG ACGTGGCCCA CGAGTTCGTG CAGGTGTGCA TGGTGCCCCA GCAGGCCCCC
CACCTGATAG ACCGCGCGAT CCGGATCGCC AAGAGCACCC GCTCGGTCAC CGCGGTCATC
GTCCCCGACG ACGTGGCCGA GCTGGACTAC GAGGAGCCGC CGCGGGCCCA CGGGGCGGTC
TACTCGCAGG TGGGCTTCCC CAGCCCCCCG CGCGTCGTGC CCCGGGAGGA GGACATACGG
CGCGCCGCCG AGGTGCTCAA CGCGGGCGAG CGCGTGGCGA TGCTCGTGGG GGCCGGCGCC
TTCGGCGCCG CCGGGGAGGT GAAGGAGGTC GCGGACATCC TCGGCTGCGG GGTGGCCAAG
GCACTCAACG GCAAGGCGGC GCTCCCGGAC GACCTGCCCT TCGTGACCGG CTCCATAGGG
CTGCTCGGGA CCAAGCCCTC CAACGACATG ATGGAGAACT GCGACACCCT GTTCATGGTG
GGCACCGGCT TCCCCTACTC CGAGTGGCTG CCGGAGCCCG GCCAGGCCCG CGGCGTCCAG
ATAGACCTCG ACGGCAAGAT GGTCGGGATC CGCTACCCGA TGGAGGTCAA CCTGGTGGGC
GACGCCGCCG AGACCCTGCG CGCCCTCATC CCCCACCTCG AGCGCAAGCA GGACCGCTCC
TGGCGCCGGC GGATCGAGGA GAACGTCCGG CGGTGGTGGG AGATCCTGGA CGACCGGGCG
CACCAGAGCG CCGACCCGCT CAACCCGCAG CTGGTCTTCC ACGAGCTCTC AGAGCGCCTG
CCCGAGCGCG CCATCCTCAC CGCCGACTCC GGCTCGGGCA CCAACTGGTG GGCCCGGCAC
CTCAAGGTGC GCGAGGGGAT GCAGGCCGCC CTCTCCGGGA CGCTCGCGAC CATGTGCCCG
GCGGTCCCCT ACGCCCTGGC GGCCAAGTTC GCCTACCCGG ACCGCCCCGT GATCGCCACC
GTCGGCGACG GCGCGATGCA GATGCTCGGG ATCAACGCGC TCATAGACGT CGGCAAGTAC
TGGGAGCGGT GGGCCGACCC GCGCCTGATC GTGCTGGTCC TCAACAACAA GGACCTCAAC
CAGGTGACCT GGGAGCAGCG GGTGCTCGCG GGCGACCCGA AGCTGGAGGC CTCGCAGGTC
ATCCCGGACT TCCCCTTCGC CCGCTACGCC GAGCTGCTGG GCTTCAAGGG CCTCCGGGTG
GACAGCCCGG AGGCGGTGGC CCCGGCCTGG GAGGAGGCGC TCGCCGCCGA CCGCCCCGTC
GTCTACGAGG CGATCACCGA CCCCGAGGTG CCGCCGCTGC CGCCGCACAT CCGCTTCGAG
CAGGCCTCGG GGCTGGCCCG GGCGCTGGCG AAGGGCGAGC CGGAGGCGGT CAGGATCGTC
AAGCAGTCCC TGAAGGGCAA GCTCACGGAG TTCACCAACC GGTGA
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| Protein sequence | MAKSTGQFIL ERLADWGVRR IYGYPGDGIN GLLGAFHEVG DRVEFTQTAH EEIAAFAATA
HAKFTGEVGV CMGTSGPGAI HLLNGLYDAR LDHQPVVAIV GQQKRMGLGS NYQQEVDLVS
LYKDVAHEFV QVCMVPQQAP HLIDRAIRIA KSTRSVTAVI VPDDVAELDY EEPPRAHGAV
YSQVGFPSPP RVVPREEDIR RAAEVLNAGE RVAMLVGAGA FGAAGEVKEV ADILGCGVAK
ALNGKAALPD DLPFVTGSIG LLGTKPSNDM MENCDTLFMV GTGFPYSEWL PEPGQARGVQ
IDLDGKMVGI RYPMEVNLVG DAAETLRALI PHLERKQDRS WRRRIEENVR RWWEILDDRA
HQSADPLNPQ LVFHELSERL PERAILTADS GSGTNWWARH LKVREGMQAA LSGTLATMCP
AVPYALAAKF AYPDRPVIAT VGDGAMQMLG INALIDVGKY WERWADPRLI VLVLNNKDLN
QVTWEQRVLA GDPKLEASQV IPDFPFARYA ELLGFKGLRV DSPEAVAPAW EEALAADRPV
VYEAITDPEV PPLPPHIRFE QASGLARALA KGEPEAVRIV KQSLKGKLTE FTNR
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