| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2697 |
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| Symbol | |
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| ID | 4115139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2712252 |
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| End bp | 2713058 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037472 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_645426 |
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| Protein GI | 108805489 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000108911 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTG TGCTGTTCAG GGTCTCCGCC GGTTTTCTGG TGCTGGCGCT CGCGCTGCTG
GCCCTTTCGC TCGCCCTCTC CGACTACTAC CTGGAGAAGC AGCGCGGTCT GGCCATCTCC
GGGGATCTCC GGGGGGCGAT GGAGGCCTCG CGGCTCGCGG TGCGTCTGGA CCCCTTCGAC
GCCGAGGCGC TGGAGGCGCA GGCCTCCCTG CTGCAGCAGC AGGGGCGCAG CGAGGAGGCC
CTGGACGCGC TCCGGCAGGC CGTGGAGCGG GACCCCAACA ACTACCTGCC GCACCTGATC
CTCGGCAACC TGCAGCTCTC TCTCGGGCGC TTCGAGGAGG CCGAGGAGAG CTACCGGGAG
GTTCTGGAGC TCAACCCGCG GGCCAGCGCG GCGAGCACCG GGCTGGCGCA GGCGCTCATC
CGGCAGGGAG AGCTGGAGAA GGCCCGGGAG ATCTACGAGC GGCTCGCGCA GCGGCGGGAG
ATCACCTACC TCGGCCTCTA CGACCTGGGG CGGCTGTGCG TGCGGACCGG GGAGCCCGAG
AAGGGCTACC GGTACATAAT GCGGGCCCGG CGGCAGGCGG CCGCCGGTCT GGACAGGCTC
GACGGGCCGG CCCGGGCCGA GCGGCGGGAG CTCATAGAGT CCATGGACCT CGCGCTCGCC
GACGCCCTCG TCGTGCAGGG GGAGTACGCC CGCGCCCGGC AGATAATCGC GCAGAGCGAC
TCCGAGCAGG CACCGGCGCT GCTGCACCTT CTGGAGACGG ACCCCGAGGG CTACCGGCGG
TCCGTGTTGA GCAGTGAGAT CTACTGA
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| Protein sequence | MSRVLFRVSA GFLVLALALL ALSLALSDYY LEKQRGLAIS GDLRGAMEAS RLAVRLDPFD
AEALEAQASL LQQQGRSEEA LDALRQAVER DPNNYLPHLI LGNLQLSLGR FEEAEESYRE
VLELNPRASA ASTGLAQALI RQGELEKARE IYERLAQRRE ITYLGLYDLG RLCVRTGEPE
KGYRYIMRAR RQAAAGLDRL DGPARAERRE LIESMDLALA DALVVQGEYA RARQIIAQSD
SEQAPALLHL LETDPEGYRR SVLSSEIY
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