Gene Rxyl_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2676 
Symbol 
ID4115157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2692892 
End bp2693536 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID638037451 
ProductDNA-(apurinic or apyrimidinic site) lyase / endonuclease III 
Protein accessionYP_645405 
Protein GI108805468 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CCCCGGTGGG CGAGGTGATC GCCCGGCTGA AGAGAGAGTA CCCCGACGCC 
AAGACGGCGT TGAACTGGTC GAACCCGCTG GAGCTGCTGG TCGCGGTGAT CCTCTCCGCC 
CAGTGCACCG ACGAGCGGGT GAACCGGGTC ACGGAGCGGC TCTTCAGGAA GTACCGCACC 
GCCGAGGACT ACGCGAGCGC CCCGCTGGAG GAGCTGGAGC AGGACATCCG GCCCACCGGC 
TTCTACCGCA ACAAGGCCCG CGCGATACAG GGGATGGCCC GCGCCCTGCT CGAGCGCCAC 
GGCGGGGAGG TCCCGAAGAC GATGGAGGAG CTCGTCGCCC TGCCCGGGGT GGGGCGCAAG 
ACGGCTAACG TGGTGCTCGG CAACGCCTTC GGGGTAAACG AGGGCGTGGT GGTGGACACC 
CACGTCCGGC GGGTTTCCCG GCGGCTCGGC CTTACCTCCA GCGACGACCC GGAGAAGATA 
GAGCGCGACC TCCTCCCGCA GGTGCCCGAG GAGGAGCGCA CCCTCTTCGC GCACCTCCTG 
ATCTTCCACG GCCGCCGGGT GTGCAAGGCC CGCCGCCCGG ACTGCCCCGG CTGCGTCCTG 
AACGACATCT GCCCCTCCAG CGGGCTCTCC GGCAAACCGA GCTAG
 
Protein sequence
MSAAPVGEVI ARLKREYPDA KTALNWSNPL ELLVAVILSA QCTDERVNRV TERLFRKYRT 
AEDYASAPLE ELEQDIRPTG FYRNKARAIQ GMARALLERH GGEVPKTMEE LVALPGVGRK 
TANVVLGNAF GVNEGVVVDT HVRRVSRRLG LTSSDDPEKI ERDLLPQVPE EERTLFAHLL 
IFHGRRVCKA RRPDCPGCVL NDICPSSGLS GKPS