| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2616 |
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| Symbol | |
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| ID | 4114697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2638065 |
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| End bp | 2639216 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638037389 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_645345 |
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| Protein GI | 108805408 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACC CAGGACCACG CACCGCCCTT ATCACCGGAG CCTCCCGCGG GCTCGGGCTC
GCTCTCGCCC GGCACCTCGC CGGGCGCGGC TGGCGCCTCC TCATAGACGC CCGCGGCGCC
GGGGCGCTCG AGAGGGCCCG CACGGAGCTG GCCGGGAGGA CGGAGGTCGT CGCCGTCCCC
GGCGACGTGA CCGACGCGCG TCACCGCCGG GCGCTCGCCG AGGCGGCCCG CGCCCTCGGC
GGCCTCGACG CCGTCGTCAA CAACGCCGGC ATCCTCGGCC CGAGCCCGCA GCCCGCCCTG
CTGGACTACC CCCTCGACGC GCTGGAGGAG GTCTACCGGA CAAACGTCCT CGCCCCGCTC
GGCGTGCTGC AGGCGGTCCG GGGGGAGCTT AGACCGGGCG CGCGCATAAT CAACGTCACG
AGCGACGCCG CGGTGGAGCC CTACCCCGGC TGGGGAGGCT ACGGCTCGGC GAAGGCCGCC
CTCGAGCAGC TCTCCAGCAT ACTCGCCGCC GAGAACCCGG ACCTGCGCGT CTACCAGGCC
GACCCCGGCG ACATGCGCAC CGCGATGCAC CAGGCGGCGT TCCCCGGCGA GGACATAAGC
GACCGGCCAC CGCCGGAGAA CAGCGCGCCG GGGCTCGTCG CCCTGCTCGA GGGGGACCTC
CCGGGCGGCC GCTACCGGGT GGCGGAGATC CCCACGGAGG GCGCGGCGCA GGTCGGGGCG
CAAGACGGGG CTCGAGAAGG TGCGCCGGGC GGCGTCCGGG AGCTGCGGGT GGCGCTCGCG
GTCGAGGACT TCGAGCGAGC CGCCTCGCTC TACGGCGAGG CGCTCGGGCT GGAGCTCGTC
GAGAGCTGGG ACCGCCCCGA CGGGCGAGGC GCGATCTTCG CCGCGGGCCG GGCGACCGTC
GAGGTACTCG ACCCCGGGTC GGCGAGGAGC GTGGACCTCA TCGAGGCCGG AGGCCCGGTC
TCCGGTCCCG TACGCCTCGC CCTGCGCGTC CCGGACGTAG AGGCGGCCTC GGAGGCCCTG
CTCGGGGCAG GGCTCGAGCC CGAGGGCGGC CCCGTCTCGA CGCCGTGGGG AGACCTCAAC
CGCAGGCTGC GAACGCCGGA GGGGCTGCAA CTGACCCTCT TCCGGCCCGC CGACGAGAAG
GAGCGAGTTT GA
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| Protein sequence | MDDPGPRTAL ITGASRGLGL ALARHLAGRG WRLLIDARGA GALERARTEL AGRTEVVAVP
GDVTDARHRR ALAEAARALG GLDAVVNNAG ILGPSPQPAL LDYPLDALEE VYRTNVLAPL
GVLQAVRGEL RPGARIINVT SDAAVEPYPG WGGYGSAKAA LEQLSSILAA ENPDLRVYQA
DPGDMRTAMH QAAFPGEDIS DRPPPENSAP GLVALLEGDL PGGRYRVAEI PTEGAAQVGA
QDGAREGAPG GVRELRVALA VEDFERAASL YGEALGLELV ESWDRPDGRG AIFAAGRATV
EVLDPGSARS VDLIEAGGPV SGPVRLALRV PDVEAASEAL LGAGLEPEGG PVSTPWGDLN
RRLRTPEGLQ LTLFRPADEK ERV
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