Gene Rxyl_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2612 
Symbol 
ID4114693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2635266 
End bp2636441 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content74% 
IMG OID638037385 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_645341 
Protein GI108805404 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAGCC CCGGAGAGGA AGGGCCAGAG ACGCAGGATC TCGAGCGACG CAACCGCGAG 
CTTGCCGCCG TCAACGCCGT CGCCCGGGAG CTCAACCGCT CCGTGGACCT GCAGGAGGCG
CTCCGGTTCA CCCTCGCGCG GGTCGCCGAG CTCCTGGGAC TAAAGACCGG CTGGGTCTGG
CTGATGGACG GCGGGGAGCC CTACCTGGCC GCCACCATGA ACCTCCCCTC GGTCCTGGCG
GAGAACCCGC CGCTGATGGA CGGCTCGCGC TACTGCTACT GCCTCGACAC CTACAAAAAA
GGCGACCTCC TGGAGGGGGC GGCGAACGTG AACGTCCTGG CTTGCAGCCG GCTCTCGGGG
CTGGTGGACG GCACCGACGG CCTGCGCTAC CACGCGAGCA TCCCCCTCTA CTCGGGAGAG
ACGAAGCTCG GCGTGATGAA CGTCGCCAGC CACGACTGGC GCAGCCTCTC GCGGGAAGAC
CTGCGGCTCC TGTACACCAT AGGCGACCTG CTGAGCATCG CCGTGGAGCG GGCCCGCCTC
TTCGCCCGCA GCGCCCTGCT CGGGGCCTCC GAGGAGCGCA ACCGGCTGGC GCGCGAGATC
CACGACACCA TAGCCCAGGG CCTGGCGGCG ACGGCGCTCC GGCTGGAGAC GGCGGAGGCG
CTGCTGGAGG CCGGCTCCCC CGCGGAGGCC AGGAAGGAGA TCTCCCGCGC CCTCGCCCTC
ACCCGGACGA ACCTGGAGGA GGCCCGCCGT TCGGTGCTGG ACCTCCGGGC CGCCCCGCTG
GAGGGGCGCT CCCTCGCCGA GGCGCTCGCC CTGCTGGCCG AGAGCCAGGA GCGTGAGAGC
GGCATCCCCG TCCGCTTCCG CGCCGTCAAC GGCGCGCGGC CCCTGCCGCC GCGGGTGGAG
ACGGGGCTGT ACCGCATCTG CCAGGAGGCC CTGAACAACG CCGCCCGGCA CGCGGAGGCC
AGCCGGATAG AGGTGCTCCT CACCCTGACC CCCGGGGAGG CCCGGCTGCG GGTGGAGGAC
GACGGCCGGG GCCTCGACCC CTCCCCCGCG CCGCCCGGGC GGCACGGGAT CCTGGGCATG
CGGGAGCGGG CCCGGCTTCT CGGGGGACGG CTCGAGATCT CCGAAGCCCC CGGGGGAGGC
GCGCGGGTGG AGGCGGCGGT GCCTCTGGAG GGGTAG
 
Protein sequence
MTSPGEEGPE TQDLERRNRE LAAVNAVARE LNRSVDLQEA LRFTLARVAE LLGLKTGWVW 
LMDGGEPYLA ATMNLPSVLA ENPPLMDGSR YCYCLDTYKK GDLLEGAANV NVLACSRLSG
LVDGTDGLRY HASIPLYSGE TKLGVMNVAS HDWRSLSRED LRLLYTIGDL LSIAVERARL
FARSALLGAS EERNRLAREI HDTIAQGLAA TALRLETAEA LLEAGSPAEA RKEISRALAL
TRTNLEEARR SVLDLRAAPL EGRSLAEALA LLAESQERES GIPVRFRAVN GARPLPPRVE
TGLYRICQEA LNNAARHAEA SRIEVLLTLT PGEARLRVED DGRGLDPSPA PPGRHGILGM
RERARLLGGR LEISEAPGGG ARVEAAVPLE G