Gene Rxyl_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2601 
Symbol 
ID4115062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2626727 
End bp2627503 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID638037374 
ProductABC transporter related 
Protein accessionYP_645330 
Protein GI108805393 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGACG GAGGACGGGA GCCCACGCTG AGCGCCCGCG GGATAACCAA GTCCTTTGGG 
GCGGTACAGG CCCTGAGGGG CGTGGACTTT GAGGTGTATC CCGGGGAGGT TGTGGCGCTC
ATCGGGGACA ACGGCGCGGG CAAGAGCACC CTCATCAACG TCATAACCGG GGTCTTCCCC
CCGGACTCGG GGGAGATCAT CTTCGAGGGG CGCAGGGTGG AGTTTGAGAC GCCGCACGAC
GCGAGGGATC TGGGGATCGA GACCGTATAC CAGGATCTCG CGGTGGCGCC GCAGCTGAAC
GCGGTGGCCA ACATCTTCCT CGGCCGCGAG CGGCGGAGGG AGGGTCTTCT GGGGAGGCTC
GGGTTTCTGG ACGAGAAGCG GATGCAGCGG CAGACGGAGG AGCAGCTCCG CGAGCTGCGG
GTGCGCATCC CGGACCTCAC CAAGCCCCTC AGCACATTCT CCGGCGGGCA GCGCCAGGGG
GTGGCGGTGG CCCGGGCGGT GATGTGGGCC AGCAAGGTGG TCATCATGGA CGAGCCCACG
GCGGCCCTCG GGGTGGCCCA GGCCGGCATG GTCCTCGACC TCGTGCGGCG GGTGCGCCAG
ACCGGGATAC CGGTCGTGTT CATCAGCCAC AACATGCCGC AGGTCTTCGA GGTCGCCGAC
CGGATAGTCG TCCTGCGGCT GGGAGAGGTG GCCGCCGAGC TGGACCCCAG AGAGGCCACC
ACCGACGACG CCGTGGCGGC GATGACCGGC TCGCTGCGCG GGGAAGGGGC GGCGTGA
 
Protein sequence
MNDGGREPTL SARGITKSFG AVQALRGVDF EVYPGEVVAL IGDNGAGKST LINVITGVFP 
PDSGEIIFEG RRVEFETPHD ARDLGIETVY QDLAVAPQLN AVANIFLGRE RRREGLLGRL
GFLDEKRMQR QTEEQLRELR VRIPDLTKPL STFSGGQRQG VAVARAVMWA SKVVIMDEPT
AALGVAQAGM VLDLVRRVRQ TGIPVVFISH NMPQVFEVAD RIVVLRLGEV AAELDPREAT
TDDAVAAMTG SLRGEGAA