| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2585 |
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| Symbol | |
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| ID | 4115046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2604225 |
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| End bp | 2605496 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638037357 |
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| Product | glycine betaine/L-proline transport ATP binding subunit |
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| Protein accession | YP_645314 |
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| Protein GI | 108805377 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000379474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGGATC ATACGGCCGC GGCTTCCGGG GATGCCGTCA TACGGGCTCG GGGGCTCTCC
AAGGTCTTTG GCAGGCAGGG GCGGAGGGCG CTCGAGCTGC GGCGCTCGGG CAGGAGCAAG
GCGGAGGTCG AGAAGCAGAC CGGCTCGACC ATCGGGGTCT TTGAGGCCTC CTTTGAGGTG
TGCCGGGGGG AGATCTTCGT GATCATAGGG CTTTCGGGCA GCGGCAAGTC TACGCTGCTC
AGGCTCATAA ACCGCCTCAT CGAGCCCACC GAGGGGGAGG TATATGTGGA GGGGGAGCCC
ATCTCCAGGA TGCCCGCAGG GCGGGTGCGC GAGATCCGGC GCAAGAAGAT GGGCATGGTC
TTTCAGCACT TTGGGCTTCT GCCCAACCGC AGCGTGCTAG AGAACATAAC CTTTGGGCTT
GAGATCCAGG GGGTCTGTGC GCAGGAGCGG CTGCGGCGGG GTGAGGAGGC GCTTGAGATG
GTGGGGCTTG AGGGGCAGGG GGCCAAGCGG ATCGGCGAGC TCTCTGGAGG GATGAAGCAG
CGGGTGGGGC TTGCGCGGGC CCTTGCCACG GGGCAGGAGA TCCTTCTGAT GGACGAGCCC
TTCTCGGCGC TCGACCCGCT CATAAGGCGG GACATGCAGA ACCTGTTTCT GGACATCCAG
GGGGAGATCA GGCGCACGGT GGTCTTCGTG ACCCACGACC TGGACGAGGC GCTCAGGCTT
GGGCACCGGG TGGCGATCAT GCGCGACGGC GAGATAGTGC AGGTGGGCAA CCCCGAGGAG
ATCCTCACTT CCCCTGCGGA CGAGTACGTC GAGCGCTTTA TAGAGGATGT GGACTACGCC
AAGGTGAGGA GTGCCGAGGC GGTGATGGTG GACCCCAAGG AGGTGGCCTA CGAGGCGGAG
GGGCCGCGGG TGGTGCTGCG GCGGATGAAG CGGGCTGGGA TGTCGAGCAT CTTTGTGGTT
GACGCAGAGC GGCGGCCGGT GGGTCTCTGT GAGGCGGAGG AGGTGGCGCG GCTTTTGGAG
AGCGGGGAGC GCTCTCTGTC TGGGGCCATA GACCGCTCGG TGCCCAGCGT GCGGCCGGAC
ACGCCGCTGC GGGAGGTGCT GCCTTTGTTC GTGGAGCGCA AGCTGCCCGT TGCGGTCGTC
GGCGAGCGGG GGCGCCTCGA GGGCATCGTG GTGCGCGGCG CGCTCATCGC CGGGCTGACC
ACCGGCGCGG AGAACCGGGA CGACGAGGCG GAGCCGCAGA GGGCCGACGG GGCCCTGCGG
GAGAGGGAGT AG
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| Protein sequence | MRDHTAAASG DAVIRARGLS KVFGRQGRRA LELRRSGRSK AEVEKQTGST IGVFEASFEV
CRGEIFVIIG LSGSGKSTLL RLINRLIEPT EGEVYVEGEP ISRMPAGRVR EIRRKKMGMV
FQHFGLLPNR SVLENITFGL EIQGVCAQER LRRGEEALEM VGLEGQGAKR IGELSGGMKQ
RVGLARALAT GQEILLMDEP FSALDPLIRR DMQNLFLDIQ GEIRRTVVFV THDLDEALRL
GHRVAIMRDG EIVQVGNPEE ILTSPADEYV ERFIEDVDYA KVRSAEAVMV DPKEVAYEAE
GPRVVLRRMK RAGMSSIFVV DAERRPVGLC EAEEVARLLE SGERSLSGAI DRSVPSVRPD
TPLREVLPLF VERKLPVAVV GERGRLEGIV VRGALIAGLT TGAENRDDEA EPQRADGALR
ERE
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