| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2578 |
|---|
| Symbol | |
|---|
| ID | 4115293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2598385 |
|---|
| End bp | 2599077 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638037350 |
|---|
| Product | 2, 5-diamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one reductase |
|---|
| Protein accession | YP_645307 |
|---|
| Protein GI | 108805370 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGAGG AGCCGAACCA CCTGCCGACG GTGACCCTCA GCTACGCCCA GACCCTCGAC
GGCCGGCTGG CCACCGCCGC GGGCAGCTCG CAGTGGATCA GCTGCGAAAG CTCGCTCGCC
CGCGCCCACG CGTTGCGCGC CGGGCACGAC GCGGTGATGG TGGGGGTCGG CACCGTCTGC
AGGGACGACC CGCGGCTGAC GGTGCGGCTG GTGCCCGGGG AGAACCCCCT CCGGGTGGTG
GTGGACAGCA CCCTGAGGAC GCCGCCCTCC GCCGCGGTGC TCTCCGACGG GGGGGCGGGG
CGCACGGTGC TGGCGGTCAC GGAGCGGGCG TCGCGGGAGA GGTGCGCCCG GGCCGAGCGG
CTCGGGGCGC GCGTGCTGCG GCTGCCGGAG GACGGGGAGG GGCGGGTGGA GCTGGCGGCG
CTGCTCGCCG CCCTTTGGGA GAGCGGGGTC CGCTCGGTGA TGGTCGAGGG CGGGGCCTCG
CTCATCACCT CCTTTCTGCG GGAGCGCCTC GCCGACCGGC TGGCGGTCTG CGTGGCGCCG
AAGCTTCTGG GGCGCGGGAT AGAGGCGGTG GGCGAGCTCG GGATCCGCGA CCTCGGCGGC
GCCCTGCGCC TGGAGGAGAC CTCGGTCACC CTCTGCGGGA CGGACATCCT CGTGGACGGC
AGGATCCGCT ACCCCGATGC CCCCTCCTCC TGA
|
|---|
| Protein sequence | MGEEPNHLPT VTLSYAQTLD GRLATAAGSS QWISCESSLA RAHALRAGHD AVMVGVGTVC
RDDPRLTVRL VPGENPLRVV VDSTLRTPPS AAVLSDGGAG RTVLAVTERA SRERCARAER
LGARVLRLPE DGEGRVELAA LLAALWESGV RSVMVEGGAS LITSFLRERL ADRLAVCVAP
KLLGRGIEAV GELGIRDLGG ALRLEETSVT LCGTDILVDG RIRYPDAPSS
|
|---|
| |