| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2550 |
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| Symbol | |
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| ID | 4115381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2573739 |
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| End bp | 2574599 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037321 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_645279 |
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| Protein GI | 108805342 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAGC TGCCCGAGGT GGAGACCATA AAGAACGACC TGCGCGGGCT GGTGGTCGGC
TCGCGCATCG AGCGCGCGGA GGTGCGAGAG CCCGCCCTCG TCGAGCAGCC GCCCCAGGAG
GAGTTCGTCC GGCGGCTGGG CGGCGCGCGC GTGACCGGCG CCCGCAGGCG GGCCAAGCAC
CTCGTCGTGG AGCTCGACAC CGGGGAGGCG CTCGTGTTCC AGCTCAAGAT CGGGGGCCAG
CTCCTGCTCG TCCCCCCGGT GGAGGAGCCC GAGGACAGCG TCATGCTCGT GCTCTCTCTC
GACGGCGGGC GGCGGCTCCT TCTGCGCGAC CAGACCGGGT TCAGCAGGGC CCGGCTCCTC
GGCGAAAAAG AGCTCGCGGA GCGGCTCTCC GGGCTCGGGC CCGAGCCCTT CTCGGAGGAG
TTCACGGTGC GCTACCTCAA AGAGAGGCTC GGCTCCCGCC GGGCGCAGAT AAAGCCGCTC
CTGCTCGACC AGAGCCTCAT CTCCGGCATA GGCAACATCT ACGCCGACGA GATCCTCTAC
GACGCCCGGC TGAGCCCCCG GCGCAGGGCG AGCTCCCTCT CCGAAGAGGA GTGGGAGAGG
CTTTACGCCG CCATCCGCAG CAACCTCGCC GCCGGCATCG AGCACCGGGG CACCACCGTC
AGGCTCTACA GGGACGTGCT CGGTCGGGCC GGGGAGCACC AGAACCACCT GCGGGTCTTC
GAGCGCCACG GCGGGCCGTG CCCCCGTTGC GGGGCAGAGG TGGTGCGCGA GAGGGTCGGC
GGGCGCCCGA CCCACTACTG CCCCCGGTGC CAGGACGGGG GTGGTTCCGC GGGGGATGGG
GTACAGTTAG AATTGGAGTG A
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| Protein sequence | MPELPEVETI KNDLRGLVVG SRIERAEVRE PALVEQPPQE EFVRRLGGAR VTGARRRAKH
LVVELDTGEA LVFQLKIGGQ LLLVPPVEEP EDSVMLVLSL DGGRRLLLRD QTGFSRARLL
GEKELAERLS GLGPEPFSEE FTVRYLKERL GSRRAQIKPL LLDQSLISGI GNIYADEILY
DARLSPRRRA SSLSEEEWER LYAAIRSNLA AGIEHRGTTV RLYRDVLGRA GEHQNHLRVF
ERHGGPCPRC GAEVVRERVG GRPTHYCPRC QDGGGSAGDG VQLELE
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