| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2534 |
|---|
| Symbol | |
|---|
| ID | 4115594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2551815 |
|---|
| End bp | 2553068 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638037305 |
|---|
| Product | 2-oxoglutarate dehydrogenase E2 component |
|---|
| Protein accession | YP_645263 |
|---|
| Protein GI | 108805326 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGTTG AGATACGCGT CCCGGAGCTC GGGGAGTCGG TCACCGACGC CACCGTGGGC
AGGTGGCTCA AAAAGGAGGG CGAGGCCGTA AAGAGCGGCG AGCCCATCGT CGAGGTCGAG
ACGGACAAGA TCAACTTCGA GATAGAGGCC GAGCAGGACG GGGTCCTGGA GTCCATAGCG
AAGGGCGAGG GCGAGACGGT CGGCGTCGGC GACGTGATCG GGACGATCGC CGAGGGCGAC
GGCCGGGCCG CGGCGGCCGC GGAGGAAGAG GAGGAGCCCG AGGAGAGGGA GGAGGCTCCC
GCGGCGGAGG CTCCCGCCGG GCGCGAGGAG GCGGCCGAGG AGGGCTTCAG GGCCTCCCCC
TCGGTGCGCC GCCTCGCTCA GGAGTACGGG GTCGACCTCG CCGAGGTCTC CGGGACCGGC
TCCGGCGGCA GGATCACCCG GGAGGACGTG GAGCGCCTGA TCCGGGAGCG TTCCCGCCCG
CCCGCCGCGC CGGAGGAGGA CGGCAGGAGG GAGGAGCGCC CCGCCCCGCC GCCGGAGCGG
GCGCCCGGGC GCGAGGCGCT CGAGGAGCGG GTGCGCTTCT CGCGCCGGAG GCAGACCATT
GCCCAGCGGC TCGTCGAGTC GCAGCGGAAC GCGGCGATGC TCACCACCTT CAACGAGGTG
GACATGAGCG CCGTCATGGA CCTCAGGCGG CGGCGCAAGG AGTCCTTCCA GGAGCGCACC
GGGGCCCGGC TGGGCTTCAT GAGCTTCTTC ACCAAGGCCT CCGTGGCCGC CCTCAAGGCC
TTCCCGCAGG TCAACGCCGA GCTTGCGGGA AACGAGCTGG TGCTCAAGAA GTACTACGAC
ATCGGGGTCG CCGTCTCCAC CGACGAGGGG CTGGTGGTCC CCGTGGTGCG CGACGCCGAC
AGAAAGAGCT TCGCCGAGAT AGAGAAGGAG ATAGCCGACC TCGCCGTCCG GGCGCGCGAG
GGGCGGCTCA CGCTCGAGGA CCTGCGCGGC GGTACGTTCA CCATCACCAA CGGCGGGGTG
TTCGGCAGCC TGCTCTCCAC CCCCATCCTC ACGCTGCCGC AGGTGGCGAT TTTGGGGATG
CACAAGGTGC AGGAGCGCCC GGTGGTGGTG GACGGGGAGA TCCAGGTGCG CCCCATGATG
TACGTGGCGC TCTCCTACGA CCACCGGGTC ATCGACGGGG CGGAGGCGGT CAGCTTCCTC
GTGCGGATCA AGGAGCTCGT GGAGGACCCG GAGACCCTGC TCCTGGAGGG CTAG
|
|---|
| Protein sequence | MPVEIRVPEL GESVTDATVG RWLKKEGEAV KSGEPIVEVE TDKINFEIEA EQDGVLESIA
KGEGETVGVG DVIGTIAEGD GRAAAAAEEE EEPEEREEAP AAEAPAGREE AAEEGFRASP
SVRRLAQEYG VDLAEVSGTG SGGRITREDV ERLIRERSRP PAAPEEDGRR EERPAPPPER
APGREALEER VRFSRRRQTI AQRLVESQRN AAMLTTFNEV DMSAVMDLRR RRKESFQERT
GARLGFMSFF TKASVAALKA FPQVNAELAG NELVLKKYYD IGVAVSTDEG LVVPVVRDAD
RKSFAEIEKE IADLAVRARE GRLTLEDLRG GTFTITNGGV FGSLLSTPIL TLPQVAILGM
HKVQERPVVV DGEIQVRPMM YVALSYDHRV IDGAEAVSFL VRIKELVEDP ETLLLEG
|
|---|
| |