| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2529 |
|---|
| Symbol | |
|---|
| ID | 4115589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2542337 |
|---|
| End bp | 2547193 |
|---|
| Gene Length | 4857 bp |
|---|
| Protein Length | 1618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638037300 |
|---|
| Product | glutamate dehydrogenase (NAD) |
|---|
| Protein accession | YP_645258 |
|---|
| Protein GI | 108805321 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCACCGA TGGGTTTGAA GGGCGATGTC CTGGAGAGGG TGCTGGCGCG GGTGCGGGAG
CGCATCCCCG AAGAGGCGGC GCCGCAGGTT GAGCGCTTCG TCCGCCAGTA CTACGAGTGG
GTCCCTGAGG AGGACGTCTC GGACCGCTCG GCCATAGACC TTTACGGGGC GGCGGTCTCG
CACTGGCAGC TGGGGAGGCA GAGGAAGCCG GGCGAGGTCA GGATCCGGGT GTACAACCCC
CAGCACGAGG AGCACGGCTG GCAGTCCACC CACACCGTCA TCGAGATCGT CAACGACGAC
ATGCCGTTCC TGGTGGACTC GGTGACCATG GAGCTGAACC GCCTCGGCCA CGGGATACAC
CTGCTGGTGC ACCCGATCCT GAAGGTGAGG CGCGACGGCG AGGGGATCCT TCTGGACGTG
TTGCCGCAGG GGTCGGAGGG CGAGGGGGCC CTCGCCGAGT CGTTCATGCA CCTGGAGGTG
GACCGGCACA CCGAGCCGGA GGTGCTGGAG GAGATCCGCG AGAACCTCCT GCGCGTCCTG
GGGGACGTGC GGGCGGCGGT GGAGGACTGG CCCGAGATGA GGGCCCGGGC GCTGCAGATC
GCCCGCGAGG TCCGCGAGAA CCCTCCCCCC GTGGAGGAGC CGGAGGAGGC CGAGGAGACC
TCCTCCTTTC TGGAGTGGCT CGCCGAGGAC CACTTCGTCT TTCTGGGCTA CAGGGAGTAC
GAGCTCATAG AAGAGGAGGG CGAGGACGCC CTGCGGGCGG TGCCGGAGAG CGGGCTCGGC
ATCCTGCGCA GGGAGCGCTC GAGGCCTGGC GTGCGGAGGT TCAGGGACCT GCCGCCCGAG
GCCCGCAAGC TGGTACGCGC CCCCTACCTG CTGAACCTCA CCAAGTCCAA CTCGCGCTCC
ACCGTCCACC GCCCCTCGTA CCTGGACTAC GTCGGGATAA AGCGCTTCAA GGACGGGGAG
GTCTGCGGGG AGCGGAGGTT CCTCGGGCTC TACACCTTCT CGGCCTACAG CAGCAGCGTG
CTGGAGGTGC CGATCGTGCG CCGCAAGGTG CGGCGGGTGC TGGAGCGGGC CAAGTTCCCC
CCCGGGAGCC ACAACGAGAA GGACCTCGTG GAGATCCTGG AGACCTACCC GCGCGACGAG
CTCTTCCAGA TCTCCGAGGA CGAGCTCTTC GAGATCGCCA CGGGCATCCT GCACCTGCGG
GAGCGCCAGC GGGTGAGACT CTTTGTCCGC CGCGACACCT ACGGCCGCTT CCTCTCCTGC
CTGGTGTTCG TGCCGCGGGA CCGCTACGAC ACCGACACCC GGCGGCGGAT GGAGAAGATC
CTGCTCGAGG CCTTCGACGG GAAGGGCGTG GAGTTCAACG TGCGGCTCTC GGAGTCGGTG
CTGGCCCGGC TGCACTACAT CATCTACACC GACCCAGCGC ACCCCCCGGA GTACGACCTC
GCGGAGGTGG AGGCGCATCT CGCAGAGGCG GCGCGGCTGT GGACGGACAA CCTCTACGAG
GCGCTGCTGG AGAGCCTGGG AGAGGAGCGG GGCACGGAGC TCTACCACCG CTACAAGGAG
GCCTTCCCCG CCTCCTACCA GGAGGAGTTT TTGGCCCGCC GGGCGGTGCC GGACATCCTG
AGGCTGGAGG AGCTGGAATC CGAGCAGGAT CTGCGGATGA GCCTCTACCA CCCCCTGGAG
GCCCCCGAGG ACGCGCTCCG TTTCAAGCTC TACCGCAGGG GACGCCCCAT AACCCTCTCC
GAGGCGCTGC CCCTGCTGGA GAACATGGGC GTGAAGGTCA TGAACGAGCA CGGGCCCTAC
GAGATAACGC CCTCCGGCGG GGAGCGCTTC TGGATCCACG ACTTCGGCCT GAAGGCCGAG
GGCGGGCTGC ACACCGAGGA GGTCAGGGAG ATCTTCCAGG AGGCCTTCGC CCGGCTGTGG
CGGGGCGAGG TGGAGGACGA CGGCTTCAAC CGGCTGGTGC TCGGGGCCCG CCTGGGGTGG
AGGGAGGTCT CGCTCCTGCG CGCCTGCTGC AAGTACCTGC GGCAGACCGG CCTGTCCTTC
AGCCAGCGCT ACATGGAGGA CACCCTCTAC GCCCACCCGG ACATCGCCCG CGGGCTCGTC
GAGCTCTTCA CGGCCCGCTT CGACCCCGGG AGGCCGCGCC GGGAGGAGAG CGCGGAGGAG
ATCGTCTCCG GGATAGAGCG GGCGCTCGAG TCCGTGGAGA GCCTGGACGA GGACAGGATC
ATAAGGAGCT TCCTGCGCCT GATCCTGGCG ATGACCCGCA CCAACTACTT CCAGCCCGGC
CCGCCCGGGG AGCCCGGCAA GCCCTACATC TCCTTCAAGC TGGACCCGCA GAAGGTGCCC
GGCCTGCCCC TCCCCCGCCC GATGTTCGAG ATCTTCGTCT ACTCCCCGCG CACCGAGGGG
GTCCACCTGC GCGGCGGCAG AGTCGCCCGC GGCGGCATCC GCTGGTCGGA CAGGCGGGAG
GACTTCCGCA CCGAGATCCT CGGGCTCATG AAGGCCCAGA TGGTCAAGAA CGCGGTCATC
GTCCCCGTGG GGGCGAAGGG CGGCTTCGTG GTGAAGCGGC CGCCCGAGGA GGGCGACCGG
GACGCCCTCA TGCGGGAGGT GGCCCGCTGC TACCAGACCC TGATCCGCGG GATGCTGGAC
CTCACGGACA ACCTGCGCGA CGGCGAGGTG GTGCCCCCGC CCCGGGTGGT CCGCCACGAC
GGCGACGACC CCTACCTGGT GGTGGCCGCG GACAAGGGCA CCGCCACCTT CTCCGACCTC
GCCAACGCCA TCTCCGCCGA GTACGGCTTC TGGCTCGGCG ACGCCTTCGC CTCCGGCGGC
TCGACCGGCT ACGACCACAA GAAGATGGGC ATCACCGCGC GCGGCGCCTG GGAGTCGGCC
AAGAGGCACT TCAGGGCGCT GGGCAAGGAC ATCCAGAGCG AGGACTTCAC CGTCGTGGGC
ATCGGGGACA TGTCCGGCGA CGTCTTCGGC AACGGCATGC TCCAGAGCCG GCACATCAAG
CTCGTCGGCG CCTTCGACCA CCGGCACGTC TTCCTCGACC CCAACCCCGA CCCGGAGAAG
AGCTACGAGG AGCGCAGGCG GCTCTTCGGG CTCCCGCGCT CAAGCTGGGC GGACTACGAC
CGCTCCCTGA TCTCCGAGGG CGGCGGGGTG TTCGAGAGGA CGGCCAAGTC CGTCCCGCTC
TCGCCGCAGG CGCGGGAGCT GCTCGGGGTC GAGGAGGAGC GCCTCACCCC CGCCGAGGTC
ATAAACGCTC TGCTCAAGGC GGAGGTGGAC ATGCTCTTCA ACGGCGGCGT GGGCACCTTC
GTCAAGGCCT CCTCCGAGAG CCACGCCGAG GTCGGGGACA AGGCCAACGA CGCCCTGCGC
GCCGACGCCA GCGAGCTGCG CTGCCGGGTC GTGGTGGAGG GGGGCAACCT GGGCTTCACC
CAGCGGGGCA GGGTGGAGTA CGCCATGCGC GGCGGCAGGA TCTACACCGA CGCCATAGAC
AACTCCGCGG GGGTGGACTG CTCCGACCAC GAGGTGAACA TCAAGATCCT GCTGGACTCC
GTGGTGAAGA GCGGGGACAT GACCGTCAAG CAGCGCAACG AGCTGCTCTC CCGGATGGAG
GACGAGGTGG CCTCGCTGGT GCTGCGCAAC AACTACCTGC AGACCCAGGC CATAGACAAC
TCCGTGGCGC AGGCCAACTC CATGGCCGAG GTGCACGCCC GCTACATCCG GGCCCTGGAG
GAGTCCGGGG CGCTGGACCG CGAGCTGGAG CACCTGCCCG GCCCGCAGGA GCTGGCGGAC
AGAAAGGCCG AGGGCGGCGG GCTCACCGCC CCCGAGTTCG CCGTGCTCCT GGCGTACACC
AAGATCACGC TCTACGACGA GCTGCTGCGC TCCGACGTCC CGGAGGACCC CTACCTCTCC
CACGACCTGG AGCGGTACTT CCCCGTCCCC CTGCGCGAGC GCTACGCCGG CAGGATGCGG
GAGCACCGCC TGCGGCGCGA GATCACCGCC ACCCACCTGG TGAACAGCAT GGTCAACCGC
TGCGGCACCA CCTTCGCCTA CCGGCTTGGC GAGGAGACCG GCGCGGCCAT ACCGGACATC
GTCCGGGCCT ACGCCGCCGC CCGCGAGATC TTCGGGATGC GCGCCCTGTG GGAGGAGATA
GAGGGGCTGG ACCTCAGGGT CCCCGCCTCC ACCCAGACCC GGATGCTGCT CGAGACCCGG
AAGCTGGTGG AGCGGGCCTC CCGCTGGCTG CTGCGCAACC GCCGCCCGCC GCTGGACATA
GAGGCCGCCA TCTCCTGCTT CTCCGGCGGC GCCCGGGAGC TGATGCGCAA GATCCCGCAG
CTGATGCCCG AGCCCGACCG GGAGGCGTTG CGCGAGAGGG AGGCCCGGCT CGCCGGGGAG
GGCGTCCCGG AAGAGACGGC CAAGCGGGTG GCCCTGCTCG ACGCCATGTT CTCGGTGCTG
GACATCGTGG ACGTCTCCAA CGCCACCGGC AGGCCGCTGG AGAGCGCCGC GGCCGTCTAC
TTCGTGCTGG GCGACCGGCT CCGGCTGCAC TGGCTGCGGC GGCATATAGA GGCCCTGCCG
CGCGACAACC GCTGGCAGAC GCTGGCGCGG GCGGCGCTGA GGGACGACCT GTACAACCAG
CAGGCCACCC TCACCGCCGA GGTGCTGCGC TCCACCCCCG AGGAGCCCGA CGCCGCGCAG
AAGGTGGAGG GGTGGATCGA GGCGCACCGC CGCCCCGTGG AGCGGGCCCT GCAGGTTCTG
CGGGACATCA ACTCCAGCGG CACCTTCGAC CTCTCCACGC TGCCGGTGGC GCTGCGCGAG
GTAAGGAACC TCATCACCTC CTCCGGCGTG CCGGAGACGG TGGAGGCCGC CCGCTAG
|
|---|
| Protein sequence | MAPMGLKGDV LERVLARVRE RIPEEAAPQV ERFVRQYYEW VPEEDVSDRS AIDLYGAAVS
HWQLGRQRKP GEVRIRVYNP QHEEHGWQST HTVIEIVNDD MPFLVDSVTM ELNRLGHGIH
LLVHPILKVR RDGEGILLDV LPQGSEGEGA LAESFMHLEV DRHTEPEVLE EIRENLLRVL
GDVRAAVEDW PEMRARALQI AREVRENPPP VEEPEEAEET SSFLEWLAED HFVFLGYREY
ELIEEEGEDA LRAVPESGLG ILRRERSRPG VRRFRDLPPE ARKLVRAPYL LNLTKSNSRS
TVHRPSYLDY VGIKRFKDGE VCGERRFLGL YTFSAYSSSV LEVPIVRRKV RRVLERAKFP
PGSHNEKDLV EILETYPRDE LFQISEDELF EIATGILHLR ERQRVRLFVR RDTYGRFLSC
LVFVPRDRYD TDTRRRMEKI LLEAFDGKGV EFNVRLSESV LARLHYIIYT DPAHPPEYDL
AEVEAHLAEA ARLWTDNLYE ALLESLGEER GTELYHRYKE AFPASYQEEF LARRAVPDIL
RLEELESEQD LRMSLYHPLE APEDALRFKL YRRGRPITLS EALPLLENMG VKVMNEHGPY
EITPSGGERF WIHDFGLKAE GGLHTEEVRE IFQEAFARLW RGEVEDDGFN RLVLGARLGW
REVSLLRACC KYLRQTGLSF SQRYMEDTLY AHPDIARGLV ELFTARFDPG RPRREESAEE
IVSGIERALE SVESLDEDRI IRSFLRLILA MTRTNYFQPG PPGEPGKPYI SFKLDPQKVP
GLPLPRPMFE IFVYSPRTEG VHLRGGRVAR GGIRWSDRRE DFRTEILGLM KAQMVKNAVI
VPVGAKGGFV VKRPPEEGDR DALMREVARC YQTLIRGMLD LTDNLRDGEV VPPPRVVRHD
GDDPYLVVAA DKGTATFSDL ANAISAEYGF WLGDAFASGG STGYDHKKMG ITARGAWESA
KRHFRALGKD IQSEDFTVVG IGDMSGDVFG NGMLQSRHIK LVGAFDHRHV FLDPNPDPEK
SYEERRRLFG LPRSSWADYD RSLISEGGGV FERTAKSVPL SPQARELLGV EEERLTPAEV
INALLKAEVD MLFNGGVGTF VKASSESHAE VGDKANDALR ADASELRCRV VVEGGNLGFT
QRGRVEYAMR GGRIYTDAID NSAGVDCSDH EVNIKILLDS VVKSGDMTVK QRNELLSRME
DEVASLVLRN NYLQTQAIDN SVAQANSMAE VHARYIRALE ESGALDRELE HLPGPQELAD
RKAEGGGLTA PEFAVLLAYT KITLYDELLR SDVPEDPYLS HDLERYFPVP LRERYAGRMR
EHRLRREITA THLVNSMVNR CGTTFAYRLG EETGAAIPDI VRAYAAAREI FGMRALWEEI
EGLDLRVPAS TQTRMLLETR KLVERASRWL LRNRRPPLDI EAAISCFSGG ARELMRKIPQ
LMPEPDREAL REREARLAGE GVPEETAKRV ALLDAMFSVL DIVDVSNATG RPLESAAAVY
FVLGDRLRLH WLRRHIEALP RDNRWQTLAR AALRDDLYNQ QATLTAEVLR STPEEPDAAQ
KVEGWIEAHR RPVERALQVL RDINSSGTFD LSTLPVALRE VRNLITSSGV PETVEAAR
|
|---|
| |