Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2529 |
Symbol | |
ID | 4115589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 2542337 |
End bp | 2547193 |
Gene Length | 4857 bp |
Protein Length | 1618 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638037300 |
Product | glutamate dehydrogenase (NAD) |
Protein accession | YP_645258 |
Protein GI | 108805321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCACCGA TGGGTTTGAA GGGCGATGTC CTGGAGAGGG TGCTGGCGCG GGTGCGGGAG CGCATCCCCG AAGAGGCGGC GCCGCAGGTT GAGCGCTTCG TCCGCCAGTA CTACGAGTGG GTCCCTGAGG AGGACGTCTC GGACCGCTCG GCCATAGACC TTTACGGGGC GGCGGTCTCG CACTGGCAGC TGGGGAGGCA GAGGAAGCCG GGCGAGGTCA GGATCCGGGT GTACAACCCC CAGCACGAGG AGCACGGCTG GCAGTCCACC CACACCGTCA TCGAGATCGT CAACGACGAC ATGCCGTTCC TGGTGGACTC GGTGACCATG GAGCTGAACC GCCTCGGCCA CGGGATACAC CTGCTGGTGC ACCCGATCCT GAAGGTGAGG CGCGACGGCG AGGGGATCCT TCTGGACGTG TTGCCGCAGG GGTCGGAGGG CGAGGGGGCC CTCGCCGAGT CGTTCATGCA CCTGGAGGTG GACCGGCACA CCGAGCCGGA GGTGCTGGAG GAGATCCGCG AGAACCTCCT GCGCGTCCTG GGGGACGTGC GGGCGGCGGT GGAGGACTGG CCCGAGATGA GGGCCCGGGC GCTGCAGATC GCCCGCGAGG TCCGCGAGAA CCCTCCCCCC GTGGAGGAGC CGGAGGAGGC CGAGGAGACC TCCTCCTTTC TGGAGTGGCT CGCCGAGGAC CACTTCGTCT TTCTGGGCTA CAGGGAGTAC GAGCTCATAG AAGAGGAGGG CGAGGACGCC CTGCGGGCGG TGCCGGAGAG CGGGCTCGGC ATCCTGCGCA GGGAGCGCTC GAGGCCTGGC GTGCGGAGGT TCAGGGACCT GCCGCCCGAG GCCCGCAAGC TGGTACGCGC CCCCTACCTG CTGAACCTCA CCAAGTCCAA CTCGCGCTCC ACCGTCCACC GCCCCTCGTA CCTGGACTAC GTCGGGATAA AGCGCTTCAA GGACGGGGAG GTCTGCGGGG AGCGGAGGTT CCTCGGGCTC TACACCTTCT CGGCCTACAG CAGCAGCGTG CTGGAGGTGC CGATCGTGCG CCGCAAGGTG CGGCGGGTGC TGGAGCGGGC CAAGTTCCCC CCCGGGAGCC ACAACGAGAA GGACCTCGTG GAGATCCTGG AGACCTACCC GCGCGACGAG CTCTTCCAGA TCTCCGAGGA CGAGCTCTTC GAGATCGCCA CGGGCATCCT GCACCTGCGG GAGCGCCAGC GGGTGAGACT CTTTGTCCGC CGCGACACCT ACGGCCGCTT CCTCTCCTGC CTGGTGTTCG TGCCGCGGGA CCGCTACGAC ACCGACACCC GGCGGCGGAT GGAGAAGATC CTGCTCGAGG CCTTCGACGG GAAGGGCGTG GAGTTCAACG TGCGGCTCTC GGAGTCGGTG CTGGCCCGGC TGCACTACAT CATCTACACC GACCCAGCGC ACCCCCCGGA GTACGACCTC GCGGAGGTGG AGGCGCATCT CGCAGAGGCG GCGCGGCTGT GGACGGACAA CCTCTACGAG GCGCTGCTGG AGAGCCTGGG AGAGGAGCGG GGCACGGAGC TCTACCACCG CTACAAGGAG GCCTTCCCCG CCTCCTACCA GGAGGAGTTT TTGGCCCGCC GGGCGGTGCC GGACATCCTG AGGCTGGAGG AGCTGGAATC CGAGCAGGAT CTGCGGATGA GCCTCTACCA CCCCCTGGAG GCCCCCGAGG ACGCGCTCCG TTTCAAGCTC TACCGCAGGG GACGCCCCAT AACCCTCTCC GAGGCGCTGC CCCTGCTGGA GAACATGGGC GTGAAGGTCA TGAACGAGCA CGGGCCCTAC GAGATAACGC CCTCCGGCGG GGAGCGCTTC TGGATCCACG ACTTCGGCCT GAAGGCCGAG GGCGGGCTGC ACACCGAGGA GGTCAGGGAG ATCTTCCAGG AGGCCTTCGC CCGGCTGTGG CGGGGCGAGG TGGAGGACGA CGGCTTCAAC CGGCTGGTGC TCGGGGCCCG CCTGGGGTGG AGGGAGGTCT CGCTCCTGCG CGCCTGCTGC AAGTACCTGC GGCAGACCGG CCTGTCCTTC AGCCAGCGCT ACATGGAGGA CACCCTCTAC GCCCACCCGG ACATCGCCCG CGGGCTCGTC GAGCTCTTCA CGGCCCGCTT CGACCCCGGG AGGCCGCGCC GGGAGGAGAG CGCGGAGGAG ATCGTCTCCG GGATAGAGCG GGCGCTCGAG TCCGTGGAGA GCCTGGACGA GGACAGGATC ATAAGGAGCT TCCTGCGCCT GATCCTGGCG ATGACCCGCA CCAACTACTT CCAGCCCGGC CCGCCCGGGG AGCCCGGCAA GCCCTACATC TCCTTCAAGC TGGACCCGCA GAAGGTGCCC GGCCTGCCCC TCCCCCGCCC GATGTTCGAG ATCTTCGTCT ACTCCCCGCG CACCGAGGGG GTCCACCTGC GCGGCGGCAG AGTCGCCCGC GGCGGCATCC GCTGGTCGGA CAGGCGGGAG GACTTCCGCA CCGAGATCCT CGGGCTCATG AAGGCCCAGA TGGTCAAGAA CGCGGTCATC GTCCCCGTGG GGGCGAAGGG CGGCTTCGTG GTGAAGCGGC CGCCCGAGGA GGGCGACCGG GACGCCCTCA TGCGGGAGGT GGCCCGCTGC TACCAGACCC TGATCCGCGG GATGCTGGAC CTCACGGACA ACCTGCGCGA CGGCGAGGTG GTGCCCCCGC CCCGGGTGGT CCGCCACGAC GGCGACGACC CCTACCTGGT GGTGGCCGCG GACAAGGGCA CCGCCACCTT CTCCGACCTC GCCAACGCCA TCTCCGCCGA GTACGGCTTC TGGCTCGGCG ACGCCTTCGC CTCCGGCGGC TCGACCGGCT ACGACCACAA GAAGATGGGC ATCACCGCGC GCGGCGCCTG GGAGTCGGCC AAGAGGCACT TCAGGGCGCT GGGCAAGGAC ATCCAGAGCG AGGACTTCAC CGTCGTGGGC ATCGGGGACA TGTCCGGCGA CGTCTTCGGC AACGGCATGC TCCAGAGCCG GCACATCAAG CTCGTCGGCG CCTTCGACCA CCGGCACGTC TTCCTCGACC CCAACCCCGA CCCGGAGAAG AGCTACGAGG AGCGCAGGCG GCTCTTCGGG CTCCCGCGCT CAAGCTGGGC GGACTACGAC CGCTCCCTGA TCTCCGAGGG CGGCGGGGTG TTCGAGAGGA CGGCCAAGTC CGTCCCGCTC TCGCCGCAGG CGCGGGAGCT GCTCGGGGTC GAGGAGGAGC GCCTCACCCC CGCCGAGGTC ATAAACGCTC TGCTCAAGGC GGAGGTGGAC ATGCTCTTCA ACGGCGGCGT GGGCACCTTC GTCAAGGCCT CCTCCGAGAG CCACGCCGAG GTCGGGGACA AGGCCAACGA CGCCCTGCGC GCCGACGCCA GCGAGCTGCG CTGCCGGGTC GTGGTGGAGG GGGGCAACCT GGGCTTCACC CAGCGGGGCA GGGTGGAGTA CGCCATGCGC GGCGGCAGGA TCTACACCGA CGCCATAGAC AACTCCGCGG GGGTGGACTG CTCCGACCAC GAGGTGAACA TCAAGATCCT GCTGGACTCC GTGGTGAAGA GCGGGGACAT GACCGTCAAG CAGCGCAACG AGCTGCTCTC CCGGATGGAG GACGAGGTGG CCTCGCTGGT GCTGCGCAAC AACTACCTGC AGACCCAGGC CATAGACAAC TCCGTGGCGC AGGCCAACTC CATGGCCGAG GTGCACGCCC GCTACATCCG GGCCCTGGAG GAGTCCGGGG CGCTGGACCG CGAGCTGGAG CACCTGCCCG GCCCGCAGGA GCTGGCGGAC AGAAAGGCCG AGGGCGGCGG GCTCACCGCC CCCGAGTTCG CCGTGCTCCT GGCGTACACC AAGATCACGC TCTACGACGA GCTGCTGCGC TCCGACGTCC CGGAGGACCC CTACCTCTCC CACGACCTGG AGCGGTACTT CCCCGTCCCC CTGCGCGAGC GCTACGCCGG CAGGATGCGG GAGCACCGCC TGCGGCGCGA GATCACCGCC ACCCACCTGG TGAACAGCAT GGTCAACCGC TGCGGCACCA CCTTCGCCTA CCGGCTTGGC GAGGAGACCG GCGCGGCCAT ACCGGACATC GTCCGGGCCT ACGCCGCCGC CCGCGAGATC TTCGGGATGC GCGCCCTGTG GGAGGAGATA GAGGGGCTGG ACCTCAGGGT CCCCGCCTCC ACCCAGACCC GGATGCTGCT CGAGACCCGG AAGCTGGTGG AGCGGGCCTC CCGCTGGCTG CTGCGCAACC GCCGCCCGCC GCTGGACATA GAGGCCGCCA TCTCCTGCTT CTCCGGCGGC GCCCGGGAGC TGATGCGCAA GATCCCGCAG CTGATGCCCG AGCCCGACCG GGAGGCGTTG CGCGAGAGGG AGGCCCGGCT CGCCGGGGAG GGCGTCCCGG AAGAGACGGC CAAGCGGGTG GCCCTGCTCG ACGCCATGTT CTCGGTGCTG GACATCGTGG ACGTCTCCAA CGCCACCGGC AGGCCGCTGG AGAGCGCCGC GGCCGTCTAC TTCGTGCTGG GCGACCGGCT CCGGCTGCAC TGGCTGCGGC GGCATATAGA GGCCCTGCCG CGCGACAACC GCTGGCAGAC GCTGGCGCGG GCGGCGCTGA GGGACGACCT GTACAACCAG CAGGCCACCC TCACCGCCGA GGTGCTGCGC TCCACCCCCG AGGAGCCCGA CGCCGCGCAG AAGGTGGAGG GGTGGATCGA GGCGCACCGC CGCCCCGTGG AGCGGGCCCT GCAGGTTCTG CGGGACATCA ACTCCAGCGG CACCTTCGAC CTCTCCACGC TGCCGGTGGC GCTGCGCGAG GTAAGGAACC TCATCACCTC CTCCGGCGTG CCGGAGACGG TGGAGGCCGC CCGCTAG
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Protein sequence | MAPMGLKGDV LERVLARVRE RIPEEAAPQV ERFVRQYYEW VPEEDVSDRS AIDLYGAAVS HWQLGRQRKP GEVRIRVYNP QHEEHGWQST HTVIEIVNDD MPFLVDSVTM ELNRLGHGIH LLVHPILKVR RDGEGILLDV LPQGSEGEGA LAESFMHLEV DRHTEPEVLE EIRENLLRVL GDVRAAVEDW PEMRARALQI AREVRENPPP VEEPEEAEET SSFLEWLAED HFVFLGYREY ELIEEEGEDA LRAVPESGLG ILRRERSRPG VRRFRDLPPE ARKLVRAPYL LNLTKSNSRS TVHRPSYLDY VGIKRFKDGE VCGERRFLGL YTFSAYSSSV LEVPIVRRKV RRVLERAKFP PGSHNEKDLV EILETYPRDE LFQISEDELF EIATGILHLR ERQRVRLFVR RDTYGRFLSC LVFVPRDRYD TDTRRRMEKI LLEAFDGKGV EFNVRLSESV LARLHYIIYT DPAHPPEYDL AEVEAHLAEA ARLWTDNLYE ALLESLGEER GTELYHRYKE AFPASYQEEF LARRAVPDIL RLEELESEQD LRMSLYHPLE APEDALRFKL YRRGRPITLS EALPLLENMG VKVMNEHGPY EITPSGGERF WIHDFGLKAE GGLHTEEVRE IFQEAFARLW RGEVEDDGFN RLVLGARLGW REVSLLRACC KYLRQTGLSF SQRYMEDTLY AHPDIARGLV ELFTARFDPG RPRREESAEE IVSGIERALE SVESLDEDRI IRSFLRLILA MTRTNYFQPG PPGEPGKPYI SFKLDPQKVP GLPLPRPMFE IFVYSPRTEG VHLRGGRVAR GGIRWSDRRE DFRTEILGLM KAQMVKNAVI VPVGAKGGFV VKRPPEEGDR DALMREVARC YQTLIRGMLD LTDNLRDGEV VPPPRVVRHD GDDPYLVVAA DKGTATFSDL ANAISAEYGF WLGDAFASGG STGYDHKKMG ITARGAWESA KRHFRALGKD IQSEDFTVVG IGDMSGDVFG NGMLQSRHIK LVGAFDHRHV FLDPNPDPEK SYEERRRLFG LPRSSWADYD RSLISEGGGV FERTAKSVPL SPQARELLGV EEERLTPAEV INALLKAEVD MLFNGGVGTF VKASSESHAE VGDKANDALR ADASELRCRV VVEGGNLGFT QRGRVEYAMR GGRIYTDAID NSAGVDCSDH EVNIKILLDS VVKSGDMTVK QRNELLSRME DEVASLVLRN NYLQTQAIDN SVAQANSMAE VHARYIRALE ESGALDRELE HLPGPQELAD RKAEGGGLTA PEFAVLLAYT KITLYDELLR SDVPEDPYLS HDLERYFPVP LRERYAGRMR EHRLRREITA THLVNSMVNR CGTTFAYRLG EETGAAIPDI VRAYAAAREI FGMRALWEEI EGLDLRVPAS TQTRMLLETR KLVERASRWL LRNRRPPLDI EAAISCFSGG ARELMRKIPQ LMPEPDREAL REREARLAGE GVPEETAKRV ALLDAMFSVL DIVDVSNATG RPLESAAAVY FVLGDRLRLH WLRRHIEALP RDNRWQTLAR AALRDDLYNQ QATLTAEVLR STPEEPDAAQ KVEGWIEAHR RPVERALQVL RDINSSGTFD LSTLPVALRE VRNLITSSGV PETVEAAR
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