| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2510 |
|---|
| Symbol | |
|---|
| ID | 4117096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2526117 |
|---|
| End bp | 2528039 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638037285 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_645243 |
|---|
| Protein GI | 108805306 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGC GCACCCCGAC GATCAGGGTT CTGCTGATCG GGGGGGATCC GGAGGGCGTG
CTGCCGGTTC GGGCGATGCT GGACGAGGCG GGTGCCGGGG ATTTCGACCT GACGGACGCC
GGAGGGCTCA GCGAGGCGAT CGGGCGTCTC GCAGAAGAGG ACTTCGACGC GATCCTCCTG
GACCTTCCCG ACACGCGAGG TCTGGACGCC GCCGCCCGGC TTCGGAAGGT GGCGCCCCAC
GTTCCGGTGG TGCTGGGAGA CGCCGAGGAG GTAGCGTTCC GGGCCCTGGA TGAGGGGGCG
CAGGATCGCC GGGTCAAGGG CCGGGGGAAC GGTGAGCTGC TGGTGCGCTC GATCCGCTAC
GCCGTCGAGC GCGAGCGGGC GGAAGAGGCG CTGCGGGAGA GCGAGGAGCG TTTCAGGGCC
ACCTTCGAGC AGGCCGCCGT CGGCATCGCG CACGTAGGGC TGGACGGCAG GTGGCTGAGG
GTCAACCAGA AGCTGTGCGA GATCGTGGGC TACGCCCGCG AGGAGCTGAT CGAGCTGACG
TTCCAGGACA TCACCTACCC CGACGACCTC GACAAAGACC TCGAGCACGC CCGCCGGCTG
CTAGACGGCG AGATAGGGAC CTACGCGGCG GAGAAGCGGT ACTTCCGCAA GGACGGGTCC
GTGGTCTGGG TCCACCTGAC GGTTTCGTTG GTGCGCGATC CCTGCGGCAC CCCGAAGTAC
TTCATCAGCG TCGTCGAGGA CATCACCGGG CGCAAGCGGA CCGAGGAGAG GCTCCGGCGC
ACCCTGAACG CGCTGCTCGC CCTCTACGAA GCCGGCAGGG TCCTGGGCTC CACCCTGGAG
CCGGAGAAGA TCGGCACGAA ACTTCTGGAG ATCGTACACC GGGTGGCCGA CGTCGGCGCG
GCCGCCATCA GCCTGAGAGA CGAGCAAGGG AGGTTGCGAA CGCTGCACCT CTCCGGGCCG
GAGGATCTCC TGCGGTCGGT TGGCGGCACG CCCGAAATAC AGGCCGCGCG CCGCGAGGTG
CTAAAGACCG CAGAGCACCG GACATTCCGG CTGCCGGGTG CCACGCCCCT GGAAGGGTTG
TGCCTGCCGC TCCTTCAGGC GGGGCACCGC GTCGTCGGCG TGGTGGAGGT ATACGGATCG
GAGGACCTGG TGGAGAGGGT TCCTGTGGAG CTGCTCGGCG GCCTCGCCGG CCAGGCGGCG
GGCGCGCTGG AGAACGCCCG GCTCTACGGG AAGCTGTCCG AACGCGAGGA ACAACTCAAG
GCCTTGGTCG GGAAGCTCAT GGCAGCCCAG GAAGAGGAGC GGCGCCGGGT CGCCTACGAG
GTGCACGACG GCGTCACGCA GGTCGCGATC GCCGCCCACC AGAACCTGCA AGCCTTCGCC
GACGACCATC CCCCCGGCTC TACCGTGGAC GCCGGGGAGC TGGACCGCCC GTTGGAGCTG
GCCCAGCAGA CGGTGGTAGA GGCCCGCCGC GTCATAGAGG GCCTACGCCC GACCGTCCTC
GACGACTTCG GCCTGGCGGC CGCCGTCCGG TTACGGGCCG AGAGGCTGCG CGCCGAAGGC
CGGCAGGCCG ACTACATGGA GAACCTGGGA GAAGAGCGCC TGCCAGCCCG GATCGAGACC
GCCCTCTACC GGGTCGCCCA GGAAGCGTTG ACGAACGCCG TCAAACACTC CGGGAGCGAC
CGCGTGTACG TCGCGCTGGA GCGCCGGGAA AAGAAGGTGC GCCTCGAAGT CCGGGACTAC
GGGCGCGGGT TCGATCCTTC TGTGGTGCCG AAGGGCTCGG GCGAGAGGGT GGGGCTCTCC
GGCATGAGAG AGAGGGTTGC GCTGCTCGGC GGGGAGTTCA AGATCCACAG CCGTCCGGGA
GAGGGCACCT CCGTAGTCGC GGAGGTGCCC ATCCCGCCGT CGGAGGAAGG CCATGAGAGA
TGA
|
|---|
| Protein sequence | MMTRTPTIRV LLIGGDPEGV LPVRAMLDEA GAGDFDLTDA GGLSEAIGRL AEEDFDAILL
DLPDTRGLDA AARLRKVAPH VPVVLGDAEE VAFRALDEGA QDRRVKGRGN GELLVRSIRY
AVERERAEEA LRESEERFRA TFEQAAVGIA HVGLDGRWLR VNQKLCEIVG YAREELIELT
FQDITYPDDL DKDLEHARRL LDGEIGTYAA EKRYFRKDGS VVWVHLTVSL VRDPCGTPKY
FISVVEDITG RKRTEERLRR TLNALLALYE AGRVLGSTLE PEKIGTKLLE IVHRVADVGA
AAISLRDEQG RLRTLHLSGP EDLLRSVGGT PEIQAARREV LKTAEHRTFR LPGATPLEGL
CLPLLQAGHR VVGVVEVYGS EDLVERVPVE LLGGLAGQAA GALENARLYG KLSEREEQLK
ALVGKLMAAQ EEERRRVAYE VHDGVTQVAI AAHQNLQAFA DDHPPGSTVD AGELDRPLEL
AQQTVVEARR VIEGLRPTVL DDFGLAAAVR LRAERLRAEG RQADYMENLG EERLPARIET
ALYRVAQEAL TNAVKHSGSD RVYVALERRE KKVRLEVRDY GRGFDPSVVP KGSGERVGLS
GMRERVALLG GEFKIHSRPG EGTSVVAEVP IPPSEEGHER
|
|---|
| |