Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2506 |
Symbol | |
ID | 4117092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2521101 |
End bp | 2521577 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638037281 |
Product | IS4 family transposase |
Protein accession | YP_645239 |
Protein GI | 108805302 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGCGCT CCAAAGGGGG ATTCTCCACC AAGCTCAACC TCGCCTGCGA CGGCAAGGGC AGGCCGCTCT CGGTGCTCAT CACTCCGGGC CAGAGCCACG GCAGCACCCA GCTTGAAGGG CTGCTCGACG CCGTGCGCAT ACCACGCCCG CAAGGATCGC CTGGCAGGCC GCGCAAACGA CCTGCCCGCC TGCTCGCCGA CCGGGGCTAC AGTTACGAGC GTTGCCGGAG GCTGCTGCGT GAGCGCGGCA TCCCGCACAC CATCCCCGAG CGCCGCGACC AGAAGGAGCG CCGGGCCGGG CGTCGGGGAC GCTGGCCCGG TTTCGACCGG GAGGCTTACC GCAGGCGCAA CGTGGTGGAA AGGTGCGTCA ACAAACTCAA ACAATGGCGC GGCATAGCGA CGAGATACGA GAAGCGGGCG GTCAACTACC GGGCGATGGT GGTCATCGCC TCGCTGATGA TGTGGTTGCC CTCGTGA
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Protein sequence | MGRSKGGFST KLNLACDGKG RPLSVLITPG QSHGSTQLEG LLDAVRIPRP QGSPGRPRKR PARLLADRGY SYERCRRLLR ERGIPHTIPE RRDQKERRAG RRGRWPGFDR EAYRRRNVVE RCVNKLKQWR GIATRYEKRA VNYRAMVVIA SLMMWLPS
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