| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2496 |
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| Symbol | |
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| ID | 4114760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2509116 |
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| End bp | 2512049 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638037274 |
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| Product | aminomethyltransferase |
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| Protein accession | YP_645232 |
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| Protein GI | 108805295 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCC GCTTGCCCTA TCAGGAAGGA GAATGGATTG ATCGATCTAA GCCTTTGACC
TTTTCTTTTG AAGGTAAGCG ATTTACTGGA TTTTCAGGAG ATACCATTAC CAGTGCATTG
TGGGCCTCTG GCGAGCGGGT GTTGGGACGT AGTTTTAAAT ATCATCGTCC CCGTGGAGTA
CTTAGCTTTG CAAACCACGA CGTTAATGTG ATGGTCCAAA ATGGGGCTGT TCCAAACATC
AGGGCAGATG TTACGCTGAT TAAGTCGAAT CAAAATCTCA GAGCAGTGAA TACTATCGGC
GGGTTAAAAT TAGACTTAGG CCAAATCAAT AATCGCCTCT CACGGTTCTT GCCAGTAGGT
TTCTATTATA AAGCGTTCCA TAAACCAGCG CGCCTATTCC CCTTATGGGA GAAGTTTATA
CGCAAAGCTG CCGGTCTTGG CTATGTCAAT GTTAATAGTA AGCGCAGACT CTGGAGCAAA
GCGTATGGTT TTGCTGATGT ACTTGTTATA GGTGCTGGAG CGGCGGGGCT TTCTGCAGCT
ATATCGGCTG CCGAAGCTGG AGCTAAAGTG GTGTTGGTGG ATGAAAATCC TAGAGTTGGA
GGGAGTCTCA CCTACGCAAA AACCATAAAC AACAACGGAA CGAGCGTACT TGCTGATTTG
GCGCGTAAGG TAGAATCGTA TCCGAATATA GAATTCTGGT CGGATACTGT AGCAAGTGCC
TACTTTGAAG ATCAGTGGGT GCCGTTAGTC CATTCTGACG GCGGCATGAC GAAAATGCGG
GCTAAGTCTG TTGTGGTTGC CTCTGGTGTA ATGGAACAGC CGGCGGTGTT TCGCAACAAC
GATTTACCGG GAATCATGCT TGGTTCTGCG GCGCAGCGTT TGATCTATCG GTATGCTGTA
AAACCTTTTG ATCGAGGTAT TGTTCTTGCA GCCAACAGTG ACGCTTATGG GTTGGTGCTA
GACTTGTTAA GCGCGGGAGT TGAAGTGGCT GCAGTAGTTG ATCTGCGCCA TGAAGGCGAA
GATTCAGCAC TTGCCGAAGT CGTGCAAGAG TCAGGTGTAA AGATTTATCG AGGCCACTGT
ATCTATGAAG CCTTGCCGAC AAGAAGGGGG ATGAGGTTGG CAGGTGCTGT GATCTGCCCG
CTGGATATAC AGAACAATCC TATCCCAAGC AGAGCATTTT ACATTGATTG TGATGGGATA
TGTATGAGTG TAGGTTGGGC AGCCAATATT GCCCTCTTAG CACAAGCTGG TTGTGAATTG
AGTTATGCTG AAAACCTTGG TCAACTGATT CCTAAAATAT CCCCAGAGGG ACTATTCGCC
GCTGGGCGGG TTAAGGGTAT TTACAATATT CAAGATAAAC TTTGTGATGG ACGGCGTGCA
GGTATATTAG CAGCTCAATA TGCTGGTTTC TCAAAGAAGA ACACAAAGAT CCCAGAAGAA
CCTGTAGACT CTTCAGCAGT AGGTCGTAGC CATCCCTACC CAATCTACGA CCACCCAAAG
GGTATGGCTT TTGTTGACTT TGACGAGGAT GTGCAACTTA AAGATATAAA GAACTCCATT
CAAGAAGGGT TTGATAGTGT TGCATTGGTG AATCGCTTTG CCACGTTGGG AATGGGGCCA
AGTCAAGGCA AACATTCCAA TATGAATGGC GTTCGAATCG TTGCCCGCAT GATGAATCAA
AGCATTGACA AAGCAGGATC TATTACATCT CGCCCTTTCT ATCATCCAGT GCCCATGGGT
GTGCTAGCTG GGCGTAGCTT CCATCCTGTA CGGCGGACAC CTATGCATTT TCGTCACGAA
GATTTCAATG CGATTTTTAT GCGCGCTGGA AACTGGCTAC GCCCCGAATA TTATGAGCTT
TCAGGCAAAG AGCGTGAAGA TGCCATTCGC GCTGAGGTGC GTTCGGTGCG CCAGCACGTT
GGCTTGATAG ATGTCGGAAC CTTGGGAAAA CTAGAAATTC ATGGCCCAGA TGCTCTTGAG
CTTATCGAAA GAATTTGCAC AGGGCATTTT GCGCGGTTAG AAACCGGCAT GACGCGATAC
GCGTTAATGA CGGACGAAGC AGGAATAATT ATAGACGATG GTGTTTGCGC TAAACTCAAC
GACGACCATT TTTACCTTAC TGCGACGACT TCAGGTGTAG ATGACCTATA TCGAGAGATG
TCCCGCTGGA TACAAATATG GGGTTTGAAT GTTGAAGTCA CAAATTATAC TGAAACATTT
GCAGCAATGA ATGTAGCAGG CCCCTCTGCT CGTGCAGTTA TGAAACAGCT GACCGAATTA
GATCTTTCAG AGAACAAATT TCCTTATCTG GCCATAAGGG AAGGAGAAGT TGCGGGAGTC
CCGGCACGAA TTATGCGAGT CGGTTTCGTA GGTGAGCTAG GATACGAAGT ACATGTCCCA
GCAACGTACG GTCTCTTTGT GTGGGATCGC ATAATTGAAG CCGGTAGAGA GTACGGAATC
AAGCCATTTG GCGTAGAAGC TCAACGCCGT CTCCGGTTGG AAAAAGGACA TATCATTGTT
GGACAGGACA CCGATGGGCT AACTAACCCG TGGGAGGCAA ATTTGGGTTG GGCCGTCAAG
CTTGATAAAC CCTTTTTTAT AGGGCAACGC ACCTTGAAAA TTCTGCGCAA AAAAATGGAT
GCCAATTTGG CACAGAGTCG TGTTTTGGTC GGTTTTAAGC TTGTGAGTAA TGAGCGGCCA
TGGCCTAAAG AGAGCCATCT CATTATTGAA GAGGACCGTA TCATCGGCCG AGTTACTAGC
ACCGCCTACA GCGAATCGCT TGACCAGGTT ATAGGGTTGG CATTTTTGCC TACAGAACGC
TCTGCTAGGG GAACGCGGTT TCAGATACGG GTAGAGGGAG GAAGCATGGT AGAAGCAGAA
GTAGTTCCGA CACCTTTCTA TGATCCAGAT AACATGCGGC AGAGAGTGTC TTGA
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| Protein sequence | MSSRLPYQEG EWIDRSKPLT FSFEGKRFTG FSGDTITSAL WASGERVLGR SFKYHRPRGV
LSFANHDVNV MVQNGAVPNI RADVTLIKSN QNLRAVNTIG GLKLDLGQIN NRLSRFLPVG
FYYKAFHKPA RLFPLWEKFI RKAAGLGYVN VNSKRRLWSK AYGFADVLVI GAGAAGLSAA
ISAAEAGAKV VLVDENPRVG GSLTYAKTIN NNGTSVLADL ARKVESYPNI EFWSDTVASA
YFEDQWVPLV HSDGGMTKMR AKSVVVASGV MEQPAVFRNN DLPGIMLGSA AQRLIYRYAV
KPFDRGIVLA ANSDAYGLVL DLLSAGVEVA AVVDLRHEGE DSALAEVVQE SGVKIYRGHC
IYEALPTRRG MRLAGAVICP LDIQNNPIPS RAFYIDCDGI CMSVGWAANI ALLAQAGCEL
SYAENLGQLI PKISPEGLFA AGRVKGIYNI QDKLCDGRRA GILAAQYAGF SKKNTKIPEE
PVDSSAVGRS HPYPIYDHPK GMAFVDFDED VQLKDIKNSI QEGFDSVALV NRFATLGMGP
SQGKHSNMNG VRIVARMMNQ SIDKAGSITS RPFYHPVPMG VLAGRSFHPV RRTPMHFRHE
DFNAIFMRAG NWLRPEYYEL SGKEREDAIR AEVRSVRQHV GLIDVGTLGK LEIHGPDALE
LIERICTGHF ARLETGMTRY ALMTDEAGII IDDGVCAKLN DDHFYLTATT SGVDDLYREM
SRWIQIWGLN VEVTNYTETF AAMNVAGPSA RAVMKQLTEL DLSENKFPYL AIREGEVAGV
PARIMRVGFV GELGYEVHVP ATYGLFVWDR IIEAGREYGI KPFGVEAQRR LRLEKGHIIV
GQDTDGLTNP WEANLGWAVK LDKPFFIGQR TLKILRKKMD ANLAQSRVLV GFKLVSNERP
WPKESHLIIE EDRIIGRVTS TAYSESLDQV IGLAFLPTER SARGTRFQIR VEGGSMVEAE
VVPTPFYDPD NMRQRVS
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