Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2486 |
Symbol | |
ID | 4114752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2503764 |
End bp | 2504585 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638037266 |
Product | IS4 family transposase |
Protein accession | YP_645224 |
Protein GI | 108805287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.839252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCTA CCGGCTTCTC AACCCTAAAA GGAAGGCGTT ACGAGTCTCT CAAGCGTCTC TCGGACTCGG AGGTCATCAC TCTGGCACTC TTCCAGCAGT TGCGGGGAGT GGAGAGCGAA CGCTCCTTCC TTAGAGACTG CGAGAGGTTC TTCTCGCACC TGTTCCCCGG AGTGGTGGGG CTGCATCCTT CTTCCTTCCA TCGACGTGTG AGGAAGCTCA GGCGTTTCCT CGAACCCCTG CGACGCGCCT TGCTGGAGGA GTTGGTCGGA GATCCAGAGA CGCTCATCGT GGACTCGACG CTGCTTTCCG TCCTGCATCC GAGGCAAGTG AAGCAGTCCG CCGCGGGCTT CGAGGGAGCA GGGTGGAGCA GGTGGGGTTC GTTCTGCGTG TACGGGGTGA AGCTGCATCT GGTGTGCTCT ACCAATCGGG TTCCCATCTC CTACGAGATG ACCGCCGCCA ACGAAGCCGA CGTACTCCTC GTCGAGGAGC TCCTCGCGGG GGCGGCCCTG GAGGAGGGCG AAGTCGCGAG GAGGCTCTTT GGGGATCTCG CCTACGAGAG CGGCGCGCTC AGGAGGCGGC TGGCCGAAAG CGGAATCCTC CTCTCGACCG AGGGAGCGAG CCGCCGACCG GCGACGAGGC AGCAGATCGA GGTCTGCTTC GCGCATCTCA AAGGAGCCTT CGGACTGGGC GAGACGCTGG CGAAGACTCT GGTGGGACTG GCGATCCGGA TCGCGGCGAA GGTGACGGCC TACACCTACG GTTTGTACGT CAACCGGCTC CTCGGAAGGC CGCAGGGGCG CATAAAGGAG CTATGGGCAT GA
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Protein sequence | MTPTGFSTLK GRRYESLKRL SDSEVITLAL FQQLRGVESE RSFLRDCERF FSHLFPGVVG LHPSSFHRRV RKLRRFLEPL RRALLEELVG DPETLIVDST LLSVLHPRQV KQSAAGFEGA GWSRWGSFCV YGVKLHLVCS TNRVPISYEM TAANEADVLL VEELLAGAAL EEGEVARRLF GDLAYESGAL RRRLAESGIL LSTEGASRRP ATRQQIEVCF AHLKGAFGLG ETLAKTLVGL AIRIAAKVTA YTYGLYVNRL LGRPQGRIKE LWA
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