Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2477 |
Symbol | |
ID | 4114744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2492943 |
End bp | 2494574 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037258 |
Product | thiamine pyrophosphate enzyme-like TPP binding region |
Protein accession | YP_645216 |
Protein GI | 108805279 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.374586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGTG CGGGAGAGGC GATAGTGGAG ATGCTGGGGG TGGCGGGGGT GCGGCGCTTC TACACCGTGC CGGGGGAGAG CTTTCTGGAG GTGCTCGACG CCGCGGAGAG GCACCCGGAC GTGCGCCTCA TCTCCACCCG CCACGAGTCC GGGGCCTCCT TCATGGCCGA GGCGGAGGCG AGGCTTACGG GCGTCCCGGC GGTGGCGATG GCCACGCGGG GGGTGGGGGC CTCCAACCTG GCCATAGGGG TGCACACCGC GAGGCAGGAC TCGACGCCGA TGGTGGTCCT GCTGGGGCAG GTGGAGAGAG GGCATCTGGG GCGGGAGGCC TTTCAGGAGG TGGACCTTGC GGGCTTCTAC GGCCCGCTGA CGAAGTGGTC TGCCACGGTG CACGAGGCGG GGAGGCTGGA GGAGCTGCTC GCGAGGGCGC TGCGGGTGGC CGTCTCCGGG CGGCCGGGGC CGGTGATGCT TGCGCTCCCG GCCGACGTTC TGGGCGAGGA GGTCGCTTTC TCTGCCGGAG GGGAGGGGGC GAGGGGCTTC GGCGTCGCCC GCCCTGCGCC CCCGGCGCAG GAGGTGAGGC GCGCCGCGCG CCTTCTCGGG GCGGCGCGCC GCCCGGTGGT CATCGCGGGG GAGCTCTCCG GGGAGGCGCG CGGGGAGCTT GTGGCGCTGG CCGAGCGCTA CGACGCGGGG GTCTACACCG CCTTCCGCCG CCAGGACCGC TTCCCCAACG GGCACGCGAA CTACCTGGGG CACCTCGGGC TCGGGACCCC TCCCCCGGTG CTGCGGGCGC TCGAGGGGGC GGATGTGGTG CTCTGCGCGG GCTGCAGGCT CGATGAGGCC ACGACCCAGG GCTATGCGCT TCCGCGCCGG GACCAGGCGC TCATCCTCAT CCACCCCGAG CCGGAGGGGG TGCCCTTCCG GGCGGAGGTT GCCATGGCCG CCGGCGTGAG GGAGGCGCTC GCCGGGCTGC TGGAGCTCGC CCCCCGCAGG GCGCCGGAGA GGGGGTGGGA AGAGGCGCGC CGGGCCTACC TGGAATCCTG CGGCGTTCCC CCCTCCCGCG CGCGTGGTGG CGGGGTGGAC CCGGCCAGGG CGGTGGCGGC GCTCAGGGAG GCGGTGCCGG AGGATGCCGT CGTGGCGAAC GACGCGGGCA ACTTCTCGCT CTTCCTGCAC CGCCACTGGT CCTACGATTG CCCGCGCACC CAGCTTGCCC CCGCAAACGG GGCCATGGGG TATGGGGTGC CCGCGGCCAT CGCCGCAGGG CTCGTCCTCC CCGCAGAGCG GTGCGTCGTC GCGGTGTGCG GCGACGGGGG CTTTTTGATG ACGGGGCAGG AGCTTGAGAG CGCGGTGCGC TACGGGGTCT CGGTGGCGGT GGTGGTCTTC CGCAACGGGC TGCACGGCAC CATAGCCATG CACCAGCTGA AGGCCCTGGG GCGGACGGCG GGGGTGGAGA TAGGGGAGGT GGACCTTGCG GCCTACGCGC GCAGCCTGGG GGCCGCGGGG TACGCGGTGC GGGAGGAGGG GGAGCTTAAG GACGCCTTCC GGGAGGCGCT TTGCGCCGGG CGCCCGGCGC TCGTGGACGT GCTCGTAGAC CCCGAGATCA TCACGCCCGA GGCGCGGCTG CAGGAGCTCT GA
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Protein sequence | MAGAGEAIVE MLGVAGVRRF YTVPGESFLE VLDAAERHPD VRLISTRHES GASFMAEAEA RLTGVPAVAM ATRGVGASNL AIGVHTARQD STPMVVLLGQ VERGHLGREA FQEVDLAGFY GPLTKWSATV HEAGRLEELL ARALRVAVSG RPGPVMLALP ADVLGEEVAF SAGGEGARGF GVARPAPPAQ EVRRAARLLG AARRPVVIAG ELSGEARGEL VALAERYDAG VYTAFRRQDR FPNGHANYLG HLGLGTPPPV LRALEGADVV LCAGCRLDEA TTQGYALPRR DQALILIHPE PEGVPFRAEV AMAAGVREAL AGLLELAPRR APERGWEEAR RAYLESCGVP PSRARGGGVD PARAVAALRE AVPEDAVVAN DAGNFSLFLH RHWSYDCPRT QLAPANGAMG YGVPAAIAAG LVLPAERCVV AVCGDGGFLM TGQELESAVR YGVSVAVVVF RNGLHGTIAM HQLKALGRTA GVEIGEVDLA AYARSLGAAG YAVREEGELK DAFREALCAG RPALVDVLVD PEIITPEARL QEL
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