| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2475 |
|---|
| Symbol | |
|---|
| ID | 4114742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2490185 |
|---|
| End bp | 2491447 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638037256 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_645214 |
|---|
| Protein GI | 108805277 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0713768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACGG CGGAGCGCCG CCCCGCGGAG GGGGCGGAGG GCATGCTGGA GGACGTGCTG
CGCCGCATCG ACCGCGGGGA GCTGGTCCGG CTCGCCCGGG AGCTGGTGCG GATCCCGAGC
GTGCACCGCC CCGGCGACGC CTCCTCCGGG GAGGGAAGGG TCGCGGCGTT CCTCGCGGGC
TACCTGGAGC GGGCGGGGTT CGCGGTGCGC GTGGAGGAGG TCTCCCCGGG CCGGCCCAAC
GTCTGGGCGG TGTGGGAGGG CCCCCTGCCC GGCCCCACGC TGCTCTTCGA GGCCCACACC
GACGTGGTCA CCGCGGGGCG CGAGGAGGAC TGGGAGCACC CGCCGTTCGG GGCGGAGCTG
GAGGGCGGCC GGATCTACGG CCGGGGTGCC TGCGACACCA AGGGCAACCT GGCCGCCGCG
GTGATCGCCG CCCGGGCCAT CAGGGAATCC GGCGTCCCCT TCCCCGGGCG CCTGATCCTG
TGCCACCCGG TGGACGAGGA GGGGATGATG TCCGGCATCA AGCACTTCAT CCGCCGGGGG
CACGCTGAGG GGGTGGACGC CGCGATCGTC TGCGAGCCGG AGGAGAACCA GCTGTGCGTG
AGGCAGAAGG GGGCCCTCCG GGTGGAGGTC CGGGTGCGGG GCAGGATGGC GCACGGGGCG
ATGCCGCAGA GCGGGGTGAA CCCCGTGACG CGCGCGGCCC GCTTCGTGGT GGCCGTGGAG
GAGCTGGAGC GCGAGGAGCG GGAGCGGCAC GGCGGGGACC CGTTTCTGGG CCACCCGAGC
CTCACGCCGA CGATCCTGCG CGGCCCCGAG ACGGGGGACC CCCAGCTCAA CGTCATCCCC
TCCGGCGCCT ACGTCGCCCT GGACATCCGC ACGGTCCCGG GCCAGTCGCA CGCGGAGCTC
GTCGGGCGCC TCGAGGGCAT CCTCTCCCGC CTCCGCGCCG CCGACCCGGA CTTCGAGGCC
GAGCTGCGGG TGATGGAGGA GCGCCCCCCG ACCGAGACCC CGCCGGACGA GCCCCTCGTG
CTGGCGATGG CGGCGGCCTA CAGGCGGCTG ACCGGGCGGG AGCCGCGCTA CAACGGGGTC
CCCGGGGCGA CGGACGGGAC GTTTCTGCAC GAGTGGGCGA ACGTCCCGGT GGTGACCACC
GGGGCGGGGC TGCGCGAGAT CCCGCACCAC GCCGACGAGT GGGTCGGGGT GGAGGAGCTC
TACGAGACCT GCAGGCTCTA CGCCGCCTCC GCCCTGTACT ACTGCTGCGA GAAGGGAGGC
TAG
|
|---|
| Protein sequence | MSTAERRPAE GAEGMLEDVL RRIDRGELVR LARELVRIPS VHRPGDASSG EGRVAAFLAG
YLERAGFAVR VEEVSPGRPN VWAVWEGPLP GPTLLFEAHT DVVTAGREED WEHPPFGAEL
EGGRIYGRGA CDTKGNLAAA VIAARAIRES GVPFPGRLIL CHPVDEEGMM SGIKHFIRRG
HAEGVDAAIV CEPEENQLCV RQKGALRVEV RVRGRMAHGA MPQSGVNPVT RAARFVVAVE
ELEREERERH GGDPFLGHPS LTPTILRGPE TGDPQLNVIP SGAYVALDIR TVPGQSHAEL
VGRLEGILSR LRAADPDFEA ELRVMEERPP TETPPDEPLV LAMAAAYRRL TGREPRYNGV
PGATDGTFLH EWANVPVVTT GAGLREIPHH ADEWVGVEEL YETCRLYAAS ALYYCCEKGG
|
|---|
| |