| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2456 |
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| Symbol | gabD2 |
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| ID | 4115298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2471050 |
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| End bp | 2472675 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638037236 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_645195 |
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| Protein GI | 108805258 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.31424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGACGC AGGGGGCGGC GCGGGACGGC CGGGCGTACC CGACGACCGC GGAGCTTATG
GCCGCCACCG GGCGGGTCGG CCGCGGGCTG CTCGAGGCCC TCGCCGGGGA GGCCGCCGGC
GGGGCGGGGG GGAGGCTCGA GGTGGAGTGC CCCTTCAACG GGGAGGTCTT CGCCCGGGTG
CCGCGCTGCG ACCCCGGGGA GGTCGCCGGC GCCTTCCGCC GGGCCCGCGC GGCGCAGGAG
CGGTGGGGGC GGCTCTCCTT CCGGGAGCGC GGGAGGATCT TCCTCCGCTT CCACGACGAG
GTGCTGCGCA GGAGGGACGA GATCCTGGAC CTCGTCCAGC TCGAGACCGG CAAGGCCCGC
CTGCACGTCT TCGAGGAGGT GATGGACGTC GCCATCGCCT CCCGCTACTA CGCCCACGCC
GCGGAGCGCC ACCTGAGGAG CCGCCGCAGG CGCGGCGTCG TCCCGCTCCT CACCTCCGCC
GTGCACCACC GGCACCCGAA GGGCGTCGTC GGGTTTATAG CGCCGTGGAA CTACCCGCTC
ACCCTCTCCA TCTCCGACGC CGTGCCCGCG CTCATGGCCG GCAACGCCGC CGTCATAAAG
CCGGACCGCA AGACCCCGCT CACCGCCCTG TGGCTCGTGC GGCTGCTCAG GGAGTGCGGG
CTGCCGCGCG AGCTCGTGCA GGTCGTCTGC GGGCCCGGGG GCGAGCTCGG CCCCCCCATC
GTCGAGAACG CCGACTTCGT CATGTTCACC GGCAGCACCG CTACCGGCCG GGAGGTCGCC
GCCGCGGCCG CCCGGCGGCT CGTGGGCTTC TCGCTCGAGC TCGGCGGCAA GAACCCCATG
GTCGTCTTCG AGGACGCCGA CCTCGACCGG GCCGTGGAGG GGGCGGTCAG GGCCTGCTTC
TCCAGCGCCG GGCAGCTGTG CATGTCCGCC GAGCGGCTCT ACGTGCACGG CGCGGTGTAT
GGCGAGTTCC TCTCCCGCTT CGCCGAAAGA GCGGGGCGGG TGAGGCTGGG CGCGGGGCTC
CACTACGGCT TCGAGATGGG CTCCCTCATC TCCGCCGGGC AGCTCGAGCG CGTCTCCTCC
CACGTGGGGG AGGCCGTGGA GCGGGGGGCA GAGGTGCTCG CCGGGGGGCG GGCGCGCCCG
GACATAGGCC CCTACTTCTA CGAGCCGACC GTGCTCCGGG GGGTGGACGA GGGGGCGCGC
CTCTTCTCCC AGGAGACCTT CGGCCCCGTG GTCTCAGTCT TCCCCTTCCG CACCCCGGAG
GAGGCCGTGA GGCTGGCCAA CGCCACCCCC TACGGCCTCA ACGCGAGCGT CTGGACCCGC
GACCTGCGCC GGGGGGCCGA GGTCGCCCGG CGCATCGAGG CCGGCACGGT CAACATAAAC
GAGGCCTACG CCCCCGCCTG GGCCTCGACC GACGCCCCCA TGGGCGGCTT CAAGGACTCC
GGTCTGGGGA GGAGGCACGG CGAGGAGGGG ATCGTCAAGT ACACCGAGTC GCAGGCCGTG
GTGACCCAGC GGCTCCTGCC GCTCGTGGCC CCGGTCTTCG GGATGGGGGG CGAGACCTAC
GCCGGGCTGA TGTCCCTGTC CCTGCGACTC ATGCGGCGCC TGCCCGGGGT GAGGGGGCGC
TGGTAG
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| Protein sequence | MRTQGAARDG RAYPTTAELM AATGRVGRGL LEALAGEAAG GAGGRLEVEC PFNGEVFARV
PRCDPGEVAG AFRRARAAQE RWGRLSFRER GRIFLRFHDE VLRRRDEILD LVQLETGKAR
LHVFEEVMDV AIASRYYAHA AERHLRSRRR RGVVPLLTSA VHHRHPKGVV GFIAPWNYPL
TLSISDAVPA LMAGNAAVIK PDRKTPLTAL WLVRLLRECG LPRELVQVVC GPGGELGPPI
VENADFVMFT GSTATGREVA AAAARRLVGF SLELGGKNPM VVFEDADLDR AVEGAVRACF
SSAGQLCMSA ERLYVHGAVY GEFLSRFAER AGRVRLGAGL HYGFEMGSLI SAGQLERVSS
HVGEAVERGA EVLAGGRARP DIGPYFYEPT VLRGVDEGAR LFSQETFGPV VSVFPFRTPE
EAVRLANATP YGLNASVWTR DLRRGAEVAR RIEAGTVNIN EAYAPAWAST DAPMGGFKDS
GLGRRHGEEG IVKYTESQAV VTQRLLPLVA PVFGMGGETY AGLMSLSLRL MRRLPGVRGR
W
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