Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2433 |
Symbol | |
ID | 4115352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2447910 |
End bp | 2448746 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037212 |
Product | formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_645172 |
Protein GI | 108805235 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.255932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCGAGC TCCCGGAGAC GACGGTCATC TCGGAGGACA TCCGGCGCCT GGCCGCGGGC CGGCGGGTGC TGCGGGCGGA GGTCTTCCGC CCCGACGTGA CCAACGTCCC GCCCGAAGAG TTCTCCGGCC GGTTGCGCGG CCGGGTGCTG GAGGGCACGG GGCGGCGGGG GAAGCTCATC GTGCTGGACT TCGGCGGGGT GGTGGGGCTG GTGCACCTCG TGATCTCGGG CCGCGTCCTG CGGCTTCCGG CCTGGACGGA GCCGGACCGC CTCAACACGG CCGTCCTGGA GTTCGAGGGC GGCCCCGTGC TCTCCTTCGC GAAGCTCTGG CTGGGCTACT TCCACCTCTA CGAGCCGGAG CGGGTGGGGG AGCACCCGCT CCTCGCCCGG CTCGGGCCCG ACCCCTTCTC CGAGGGCTTC ACCCCCGGCT ACCTGGCCCG GGCCTTCCGG CGGCGGGCGG CGGTGAAGGG CCTGCTGCTG GACCAGTCGG TGGTCGCCGG GCTGGGGAAC ATCTACGTGG ACGAGGTGCT CTTCGCCGCC CGCGTGCACC CCTTGCGCCG GGCCGACACC CTGAGCGAGG AGGAGATCCG CGCCATCCAC GCGGCGACCC GGAAGATACT GCGCCGCGCC ATAGAGCTGC GGGGCACCAC CTTCGACTCC TACCACGACG CCTTCGGGGA GTCCGGCGGC TACCAGCGCG AGCTGAGGGT CTTCGCCCGG GCGGGAAAGC CCTGCCCCTC CTGCGGCGCC CGGATCGCGA AGCTGCGGGT GGCGGGCCGG GGGACGCACG TCTGCCCGGC CTGCCAGAGC CCGCCTACTG CTGCCAGCGG CGCCTGA
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Protein sequence | MPELPETTVI SEDIRRLAAG RRVLRAEVFR PDVTNVPPEE FSGRLRGRVL EGTGRRGKLI VLDFGGVVGL VHLVISGRVL RLPAWTEPDR LNTAVLEFEG GPVLSFAKLW LGYFHLYEPE RVGEHPLLAR LGPDPFSEGF TPGYLARAFR RRAAVKGLLL DQSVVAGLGN IYVDEVLFAA RVHPLRRADT LSEEEIRAIH AATRKILRRA IELRGTTFDS YHDAFGESGG YQRELRVFAR AGKPCPSCGA RIAKLRVAGR GTHVCPACQS PPTAASGA
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