Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2424 |
Symbol | |
ID | 4115343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2437226 |
End bp | 2438923 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638037203 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_645163 |
Protein GI | 108805226 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0912792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAGA TGAGAGGGAT ACGCGGGCTA AGCCGCAGGG AGTTTCTGCA GCTCGGCGGG GCCGGCCTGG CAGGGGCCGC CCTGCTCGGC GTGGCCGGGT GCGGCGGCGG GGAGACCATC GGCGGCGGCC AGCAGGGCGG CGGGGGAGAG AACGTCTTCA CCTTCGGGCG CGGCGCGGAC TCCGTGGGGC TGGACCCCAT AAACGTCACC GACGGCGAGT CGCTCATCGT GTGCCGGCAG GTGTTCGACG GGCTGCTGGA CTTCAAGCCC GAGACTACGG ACCTCGTGCC GGCGCTGGCC ACCGAGGTCC CGGAGCCCGA GGAGGGCGGC CGCGTCTACA CCTTCAGGCT GCGCGAGGGC GTCAGGTTCC ACGACGGGGA GCCCTTCAAC GCCGAGGCCG TGGTCTTCAA CTTCGAGCGC TGGAAGAACA CGGGCAGCCC CTACCACAAG GGCGGCGGGA GCCAGAGCTC CAACTTCGCC TACTACGCGG GCATGTTCGG CGGCTTCGAC GACGACTCCG TCATAGAGAG CGTGGAGGCG GTGGACGAGC GCACCGTCCG GTTCACCCTC AGGGAGGTGC AGGCCCCCTT CCTGCGCAAC ATAGCCATGA GCCCCTTCGG GATCGCCTCC CCCAAGGCCA TAAGGGAGGA CGTCGAGCGG TTCTGGAAGA ACCCGGTGGG CACCGGGCCC TTCAAGTTCG TCTCCTGGGA CCAGGGCTCG ACGGTCAGGC TCGAGAAGAA CCCCGACTGG TGGGGGACCG ACCTGCCCGA GGAGGAGGGC GGCGGCGGGC CGTTCGTGGA CCGGGTGGTC TTCCGCTCCA TCCCGGACAA CACCGCGCGG GTCGCGGCGC TCTCCGGCGG CCAGCTCTCC GGGGCCGACG GGCTCACCCC GGACGACGTG CCGACCATCG AGGAGGACCC CAACCTCAAG GTCATAACCC GGCCGCCGAT GAACATCGGG TACCTGGCGA TGAACGTCCA GAAGGAGCCC TTCAACGACC GGCGGGTGCG GCTGGCGGTG GCGCACGCCA TAAACATGCC CGAGATCGTG GAGGCCTTCT TCGGGGACAC CGGGCAGGTG GCCTCCAACC CCTACCCGCC GACCATCCCG TACTTCCGGG AGGAGACCGA GCCCTACGAG TACGACCCCG AGCGGGCGCG GCGGCTGCTG CGGGAGGCCG GGCTCGGGGA CGGGTTCGAG GCCGAGCTGT GGTACATGCC CATCCCGCGC CCTTACATGC CCGACGGCAA GGGCATAGCC CAGGCCATGC AGCGCGACCT CAAGGAGGTC GGCATCGACG TGAGGCTGGT GACCCGCGAG TGGGGGACCT ACCTCGAGGA GACCGGCCGG GGGGCCCACG ACATGTGCCT GCTCGGGTGG ACCGGGGACA ACGGCGACCC GGACAACTTC CTCAACGTGC TGCTCTCCAG CAAGACCGCC ACGAAGACCG ACGCGCAGAA CGTCGCCTAC TACAAGAACC CGGAGCTCGA CAGGATCCTG GAGCGGGCCG CCTCCACCAT AGACGAGGAC GAGCGGCGGA GGCTCTACGT CCGGGCGCAG GAGATCGTCC ACGAAGACGC CCCCTGGGCC CCCATAGCCT ACGCCGAGCC GCCGCTGGGC TTCCAGAACT CCGTGCGGGG CTACCACCCG AGCCCGACCG GCGGCGAGTC GTTCAACTCC GTGAAGATCT CCGGGTAA
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Protein sequence | MTEMRGIRGL SRREFLQLGG AGLAGAALLG VAGCGGGETI GGGQQGGGGE NVFTFGRGAD SVGLDPINVT DGESLIVCRQ VFDGLLDFKP ETTDLVPALA TEVPEPEEGG RVYTFRLREG VRFHDGEPFN AEAVVFNFER WKNTGSPYHK GGGSQSSNFA YYAGMFGGFD DDSVIESVEA VDERTVRFTL REVQAPFLRN IAMSPFGIAS PKAIREDVER FWKNPVGTGP FKFVSWDQGS TVRLEKNPDW WGTDLPEEEG GGGPFVDRVV FRSIPDNTAR VAALSGGQLS GADGLTPDDV PTIEEDPNLK VITRPPMNIG YLAMNVQKEP FNDRRVRLAV AHAINMPEIV EAFFGDTGQV ASNPYPPTIP YFREETEPYE YDPERARRLL REAGLGDGFE AELWYMPIPR PYMPDGKGIA QAMQRDLKEV GIDVRLVTRE WGTYLEETGR GAHDMCLLGW TGDNGDPDNF LNVLLSSKTA TKTDAQNVAY YKNPELDRIL ERAASTIDED ERRRLYVRAQ EIVHEDAPWA PIAYAEPPLG FQNSVRGYHP SPTGGESFNS VKISG
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