| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2409 |
|---|
| Symbol | |
|---|
| ID | 4115368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2421124 |
|---|
| End bp | 2421903 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638037189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_645149 |
|---|
| Protein GI | 108805212 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4336] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.558045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCGC CGGGAGCGGC GGAGGCGCGG GAGAGGATCC GGCGGGGGGA GCACGCCGGG
CCTACGGCGG GCCTCGCCCC CGGCTATGCC CAGGCGAACC TGGTGATCCT CCCCGAGGAG
CACGCCCTGG ACTTTCTCAG GTTCTGCGTG AGGAACCCGA AGCCCTGCCC GCTCCTGGAG
GTCACCGACA CGGGCTCCCC CGTCCCCCGG ACCCTGGCCC CCGGGGCGGA CCTGCGCACG
GACGTGCCCC GCTACCGGGT CTACGAGCGC GGGAAACTCG TCGAGGAGCC CGCGGACATC
CTCCCCCGCT GGCGCGGGGA CCTGGTCTGC TTTCTCCTGG GGTGCAGCTT CACCTTCGAG
CGGGCGCTGC TGGCGGCGGG GCTCCGGCTG GCGCACGTGG AGCAGGGCAG GAACGTCCCC
ATGTACGTCA CGAACCGGCG GTGCGCCCCC TCGGGGCCCT TCGCGGGACC GCTGGTGGTC
AGCATGCGGC CCTACCGGCC GGAGGAGGTG CCGCGGGCCG TCTCCGTCTC CGCCCGCTAC
CCGGCGATGC ACGGGGCACC GGTGCACGTC GGAAGGCCGG AGGCCCTGGG GATAAAAGAC
CTCGGCCGGC CGGATTTCGG CGACGCCGTG ATCCTCGGCG AGGGCGAGAT CCCCGTCTTC
TGGGCCTGCG GGGTGACCCC ACAGGCGGTC GCGCTGCAGG CCGGGCTGCC GCTCGTGATC
ACCCACAGCC CGGGCCACAT GTTCGTCACC GACCGCCGGG ACGCGGAGTA CGAGGTATGA
|
|---|
| Protein sequence | MGAPGAAEAR ERIRRGEHAG PTAGLAPGYA QANLVILPEE HALDFLRFCV RNPKPCPLLE
VTDTGSPVPR TLAPGADLRT DVPRYRVYER GKLVEEPADI LPRWRGDLVC FLLGCSFTFE
RALLAAGLRL AHVEQGRNVP MYVTNRRCAP SGPFAGPLVV SMRPYRPEEV PRAVSVSARY
PAMHGAPVHV GRPEALGIKD LGRPDFGDAV ILGEGEIPVF WACGVTPQAV ALQAGLPLVI
THSPGHMFVT DRRDAEYEV
|
|---|
| |