| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2405 |
|---|
| Symbol | |
|---|
| ID | 4115364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2416684 |
|---|
| End bp | 2417793 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638037185 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_645145 |
|---|
| Protein GI | 108805208 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0222007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGA CCCGGCAGAT AACGAAGCTC GGCATGCCCA AGTGGGGCCT CACCATGACA
GAGGGGACGG TCGTGCGGTG GCTCGTCGAG GAGGGGGCCG AGCTCGAGAG CGGCGACGAG
GTCGTCGAGG TCGAGAGCGA GAAGATAAAC AACGCCGTGG AGTCCCCCGC CGCGGGCGTG
CTCCGGCGCC GGGTGGCGCA GGAAGGCGAG GTGGTACCGG TGGGGGGCCT GCTCGGCGTC
ATAGCCGACC CCTCCGTCCC AGATCCGGAG ATAGACGCCT TTATAGAGGA GTTTCGCTCC
ACCTTCGTCC CGGAGGAGGA AGAGGCCGCC GGCCCGGAGC CGCAGAGGAC GGAGGTCGGC
GGCAGGAGCA TCCAGTACCT CGCGATGGGC GAGGGCGAGC CTCCCCTGGT GCTGGTGCAC
GGCTTCGGCG GCGACATAAA CATCTTCGTC TTCAACCAGC AGGCTCTGGC CTCCGACCGC
GCCGTCTACG CCCTGGACCT CCCGGGCCAC GGCGGCTCCT CCAAGGACGT GGGGAGGGGG
GATCTGGGCT TCTTCGTCGC GGTGGTCGAG GGGTTCATGG ACACCCTCGG GATAGAGCGG
GCCCACCTGG CGGGCCACTC CATGGGCGGC GCCGTAGCCG CGTCGTTCGC GCTCGCGCAC
CCCGAGAGGG TCGCCTCGCT CGTGCTAGTC GCCAGCGCCG GGCTCGGGGA GGAGATCAAC
GGCGAGTACA TCGAGGGCTT TATCGCGGCC AACCGGCGCC GCGAGATGCG CGACGTGCTC
GGGATGCTCT TCGCCGACCC GGAGCTGGTC ACCCGGGACC TGGTCAACGA CGTGCTGGCG
TACAAGCGCC TCGACGGCGT GGAGGAGGCG CTGCGGACCG TCGCCGGCAG CCTCTTCCCC
GGGGGGCGTC AGGCGCGGGT GCTGGACCTC TCGGGCCTGG AGGTCCCGGT GCTGGCGATC
TGGGGCTCGG AGGACAGGAT CGTCCCGGCC GCCCACGCGG GGAACCTGCC CGACGCAGCG
CACGTCGAGA TCCTGGAGGG CCGGGGGCAT ATGGTGCACA TGGAGGCCGC CGGCGAGGTG
AACCGCCTCA TCTCCCGGTT CGTTGGCTGA
|
|---|
| Protein sequence | MSETRQITKL GMPKWGLTMT EGTVVRWLVE EGAELESGDE VVEVESEKIN NAVESPAAGV
LRRRVAQEGE VVPVGGLLGV IADPSVPDPE IDAFIEEFRS TFVPEEEEAA GPEPQRTEVG
GRSIQYLAMG EGEPPLVLVH GFGGDINIFV FNQQALASDR AVYALDLPGH GGSSKDVGRG
DLGFFVAVVE GFMDTLGIER AHLAGHSMGG AVAASFALAH PERVASLVLV ASAGLGEEIN
GEYIEGFIAA NRRREMRDVL GMLFADPELV TRDLVNDVLA YKRLDGVEEA LRTVAGSLFP
GGRQARVLDL SGLEVPVLAI WGSEDRIVPA AHAGNLPDAA HVEILEGRGH MVHMEAAGEV
NRLISRFVG
|
|---|
| |