| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2400 |
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| Symbol | prpB |
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| ID | 4115359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2411043 |
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| End bp | 2411978 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037180 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_645140 |
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| Protein GI | 108805203 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.951557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTTTT TGGGAAGAGA GGAAGGAGAA GAGCGCGTGA GCGAGTACGG CGCGGCCCCC
TCGCCCGGCG CCCGCCTGAG GCGGGCCTGG GAAGAGGAGA GGCCGCTGCA GGTGGCAGGC
GTCATAAACG CCTACGCGGC GATCCTGGCC GAGAGCGCGG GCTTCAAGGC CCTCTACCTC
TCGGGGGCGG GGGTGGCGAA CGCCTCCTAC GGCCTGCCCG ACCTCGGCAT GACCAACCTG
AACGACGTGC TCTGCGACGC CCGCAGGATC ACGGGGGTGA CCGGCCTGCC GCTGCTGGTC
GACGCGGACA CCGGCTTCGG GCCCGCGTTC GTGATCGGAA GGACCGTGAG GGAGATGATC
CGCGCGGGGG TCGCCGGGAT CCACATCGAG GACCAGGTGC AGGCCAAGCG CTGCGGCCAC
CGGCCCGGGA AGGAGCTCGT CGAGCCCGAG GAGATGGCCG ACCGGGTGAA GGCGGCGGTC
GCTGCCAAGA CCGACCCGGA TTTCGTGGTG ATGGCCCGCA CCGACGCGGT GGCGGTCGAG
GGGCTCGACG CGGCCGTCGG GCGCGCCAGG CTCTACCAGG AGGCGGGGGC GGACGCGATC
TTCGCCGAGG CCGTAACGGA GCTCGAGGAC TACCGCCGCT TCACGCGGGC CCTGGACGTC
CCGGTGCTCG CCAACATCAC CGAGTTCGGC AAGACCCCGC TCTTCACCAC CGAGCAGCTC
TCCGGGGTGG GGGTCGGGCT CGCGCTCTAC CCGCTCTCGG CGTTCCGGGC GATGAGCGCC
GCGGCGCTCA AGGTCTACCG CACGCTCCGG GAGGAGGGCA CCCAGAGGGG CGTCGTCGGG
GAGATGCAGA CCCGCCAAGA GCTCTACGAG TTTTTGGGCT ACGAGGAGTA CGAGAAGGAG
CTGGACCGCC TGTTCGCGAA GGGTAGGGAG GGATAG
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| Protein sequence | MRFLGREEGE ERVSEYGAAP SPGARLRRAW EEERPLQVAG VINAYAAILA ESAGFKALYL
SGAGVANASY GLPDLGMTNL NDVLCDARRI TGVTGLPLLV DADTGFGPAF VIGRTVREMI
RAGVAGIHIE DQVQAKRCGH RPGKELVEPE EMADRVKAAV AAKTDPDFVV MARTDAVAVE
GLDAAVGRAR LYQEAGADAI FAEAVTELED YRRFTRALDV PVLANITEFG KTPLFTTEQL
SGVGVGLALY PLSAFRAMSA AALKVYRTLR EEGTQRGVVG EMQTRQELYE FLGYEEYEKE
LDRLFAKGRE G
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