Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2365 |
Symbol | |
ID | 4115650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2375166 |
End bp | 2376062 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638037145 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_645105 |
Protein GI | 108805168 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCGGG ACGAGGTCTT CGAGGAGCAC CGGCCCCTGC TCTTCTCCAT CGCCTACCGG ATGCTCGGGA GCGTCATGGA CGCCGAGGAC GTCGTGCAGG AGGCGTTCGT GCGCTGGCGG GGGGCGGGGG AGGTGAGGTC CCCGAGGGCC TACCTCTCCT CGGTGGTGAC GCGGCTCTGC ATAGACCAGC TGCGTTCCGC CAGGGCGCGG CGGGAGGAGT ACGCGGGGCC GTGGCTGCCG GAGCCGCTCG CGGCGGAGCC CGCGGCGGAT CCCGCGGTCC TCGACGAGAC GCTCTCGATG GCCTTCCTGG TGCTGCTGGA GAGCCTCTCG CCGGTGGAGC GGGCGGTCTT CCTCCTGCGG GAGGTCTTCG ACTACGGCTA CGCGGAGATC GCGGAGATCG TCGGCAAGAG CGAGGCCAAC TGCCGCCAGA TCGCGCGCCG CGCCAGGCAG TCGGTCGCCG CCCGCCGCCC CCGCTTCGAT GTCTCCCCCG GGGAGGGGGA GCGGCTGGTG AGGCGGTTCG TCGAGGCCAG CATGAGCGGG GACATGGAGG GGCTGCTGCA GGTTATATCC GAGGACATAA CCCTCTGGAC GGACGGCGGC GGCAGGGTGC GCGCGGCGCG CAACCCCATC CACGGCGCCG ACCGGGTGGC CCGCTTCCTG CTGGGTGTGA TCCCCGAGGC GCCGGAGGGA CTGGAGATCC GCTATGCCAG GGTCAACGGC CAGCCCGGCA TCGTCAGCTA TTACGCGGAC GGGACTGCGC AGGGGGCCGC GGCCTTCGAC ATCTCCGGCG GCCGCATAAG GGCCGTCCGC TACGTCATAA ACCCGGAGAA GCTCCGCGGC ATACCCCCGC TACTGAGGAG GTCGAGCGAT GATCCCGAAG AAGAAGGCCC TTCTTGA
|
Protein sequence | MSRDEVFEEH RPLLFSIAYR MLGSVMDAED VVQEAFVRWR GAGEVRSPRA YLSSVVTRLC IDQLRSARAR REEYAGPWLP EPLAAEPAAD PAVLDETLSM AFLVLLESLS PVERAVFLLR EVFDYGYAEI AEIVGKSEAN CRQIARRARQ SVAARRPRFD VSPGEGERLV RRFVEASMSG DMEGLLQVIS EDITLWTDGG GRVRAARNPI HGADRVARFL LGVIPEAPEG LEIRYARVNG QPGIVSYYAD GTAQGAAAFD ISGGRIRAVR YVINPEKLRG IPPLLRRSSD DPEEEGPS
|
| |