Gene Rxyl_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2365 
Symbol 
ID4115650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2375166 
End bp2376062 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content71% 
IMG OID638037145 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_645105 
Protein GI108805168 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGG ACGAGGTCTT CGAGGAGCAC CGGCCCCTGC TCTTCTCCAT CGCCTACCGG 
ATGCTCGGGA GCGTCATGGA CGCCGAGGAC GTCGTGCAGG AGGCGTTCGT GCGCTGGCGG
GGGGCGGGGG AGGTGAGGTC CCCGAGGGCC TACCTCTCCT CGGTGGTGAC GCGGCTCTGC
ATAGACCAGC TGCGTTCCGC CAGGGCGCGG CGGGAGGAGT ACGCGGGGCC GTGGCTGCCG
GAGCCGCTCG CGGCGGAGCC CGCGGCGGAT CCCGCGGTCC TCGACGAGAC GCTCTCGATG
GCCTTCCTGG TGCTGCTGGA GAGCCTCTCG CCGGTGGAGC GGGCGGTCTT CCTCCTGCGG
GAGGTCTTCG ACTACGGCTA CGCGGAGATC GCGGAGATCG TCGGCAAGAG CGAGGCCAAC
TGCCGCCAGA TCGCGCGCCG CGCCAGGCAG TCGGTCGCCG CCCGCCGCCC CCGCTTCGAT
GTCTCCCCCG GGGAGGGGGA GCGGCTGGTG AGGCGGTTCG TCGAGGCCAG CATGAGCGGG
GACATGGAGG GGCTGCTGCA GGTTATATCC GAGGACATAA CCCTCTGGAC GGACGGCGGC
GGCAGGGTGC GCGCGGCGCG CAACCCCATC CACGGCGCCG ACCGGGTGGC CCGCTTCCTG
CTGGGTGTGA TCCCCGAGGC GCCGGAGGGA CTGGAGATCC GCTATGCCAG GGTCAACGGC
CAGCCCGGCA TCGTCAGCTA TTACGCGGAC GGGACTGCGC AGGGGGCCGC GGCCTTCGAC
ATCTCCGGCG GCCGCATAAG GGCCGTCCGC TACGTCATAA ACCCGGAGAA GCTCCGCGGC
ATACCCCCGC TACTGAGGAG GTCGAGCGAT GATCCCGAAG AAGAAGGCCC TTCTTGA
 
Protein sequence
MSRDEVFEEH RPLLFSIAYR MLGSVMDAED VVQEAFVRWR GAGEVRSPRA YLSSVVTRLC 
IDQLRSARAR REEYAGPWLP EPLAAEPAAD PAVLDETLSM AFLVLLESLS PVERAVFLLR
EVFDYGYAEI AEIVGKSEAN CRQIARRARQ SVAARRPRFD VSPGEGERLV RRFVEASMSG
DMEGLLQVIS EDITLWTDGG GRVRAARNPI HGADRVARFL LGVIPEAPEG LEIRYARVNG
QPGIVSYYAD GTAQGAAAFD ISGGRIRAVR YVINPEKLRG IPPLLRRSSD DPEEEGPS