| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2346 |
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| Symbol | |
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| ID | 4115612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2357087 |
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| End bp | 2359132 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 638037126 |
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| Product | regulator of polyketide synthase expression-like protein |
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| Protein accession | YP_645086 |
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| Protein GI | 108805149 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00520289 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGAT GGGAGGGCGC CGCGGGCCTG CTGCGGCGGG CGGCGTTGGA GCCGGCCGGG
CGGGGGGCGT GGGTGAGGCT CGCGCTGGAG GAGGCGGCGC GGGCGGCGCC GGCGGCGGGG
ACGCTGCTGG CCCGCCCGGA TCCCGCGGGG AGGGAGCGGT GGCTCGTGGA GTACGCGGGC
GCGGCCCCCG AGGAGGTACG CCGGTGGGCG GCGGGGAGGC TCGGGTCCGG CGAGGAGGAG
CCGGGGTCCG GGGCCCTCTG GCGCGGCGCC CCGTGCCTGC CGGACGCTCC CCCCCGGGTC
TTCCGCGTCG CGGGCGGGCT GTGGGTGCTG TGGGCCTTCG GGCCGCTCGA GGGAAGGGGC
CCGGAGCTCT TCCGGGGTGC GGTGGAGGAG CTCATCCAGG TCGAGCGCCG GGAGCGGGAG
CACCTCGGCG GCGGGAGGCT CGGGGAGCTT GTACCCGCGC TCCGGAGCGG GGACGAGGAG
TGCCTGCCGG AGCTGCTGGA GCTCGTCCGC CGGGTGGGCC GGGCGGAGTT CGCCTACTGG
GGAGGGGTGC ACGACGGCGT GGTGGAGGTC CGGCGGCACG TGGGGGCCCG CAGCCCCGGC
TTCGGCTTCG AGCTTCCGCT GGGGGAGGGG GTCGGCGGCA GGGCCTTCGC CGGGCGGCGG
CCGCTGGAGG TGGCGGACTA CCTCAACTGC CAGTACCGCT ACCCGGGGGT GAGCGACGCC
ACGGACAGCG AGGGGGTACG CTCGGTGCTC GCCCTCCCCA TCGGCGGGCG GGAGGCCGGC
TCGGGGGCGG TGCTGTACGC CGTCCGGCGC TCCGTCGCCC CCTTCTCGGG GGAGGAGCGC
GCGCTGCTCG CGCGCCTCCG CGACGCGCTG GAGCCTCTGG AGACCGGGCG GGGGGCCCGC
AGGGCGGCGG CAGCGGGGCC CGGCGCCCTG CTCCTGCAAC GCGCGGGGCT GCGGAGGCTG
CTGCTCGGCT CCGACCGGGT GCGGGAGGTG GAGGAGTGGC TGGAGGGGGT GCTCCGGTGC
CGCGCCGTGC TCGTCGACGC CGGGGGGCGG CCGTACGCTC CGGAGAGCCT CGACCGGCTG
GAGCGGCTCC GGCTCGCGGG GGGCAGGCCG CGCTCCCTTC CGCTCTCCGG CGGCCGGGGC
TCCCTGCTGG TGTGGGGCGG GGACCTCCGC GTGGAGGGGT GGCCGGATCT CATGGAGGAC
GTGCTCGCCG CCTTCCGGGT GATCCTGGAC CGGGCCGAGC GGGCGCACGA GCGGCTCAAC
AGCCGCCGGT CGCGGTGGCT GCGGGCCGTC GCGGCGGGCC AGACCGGAGA GGAGGCCCGC
AGGGAGGGGC ACCGTCTCGG GCTCCCGGAG GAGAACGGCG AGGTGTGGGC GTTCGCCTGG
GAGCCGGACC GGGCGGGCGG CGCCCGGCTG CGGATGGTCG CCGACGAGGT GGCGCTGGAC
ATGCTGGACG TCCCCTTCAT CACCCTGGAG GAGGGGCTCG GGGCGGTGCT GGTGCGCGGG
CGCCCCGCCC ATCCCCCCTC TGCTGTGCGC GACGCGCTGC TGCGGCACTT CGGCCCCGCC
CCGCTGTGGC TGGTGCACGG CGCGGGCTAC GAGTCGCTGG AGGGGCTCGA GGAGGCGCTG
GCGATGTCCC TGTCCGCCGC GGAGGATCTG CGCCGGAGCC GCTCCGGGCC TTACGTCTGC
GAGGTGCGGG GGCGCGGCCT GGACAGCCTC CTGGACGACC CCCGCCTCTC CGGCGAGCTC
TCCGGGTTCG CCGGGCGCCT GCTCGAGCCC CTGCTGGAGC ACGACGGCCG CCACGGCACC
CGGCTTACGG AGACGTTCTG CCTGGCGCTC GCGCTGGGCT CGGCGGAGGC CGCCGCCGAC
CGCCTGTTCG TCCACCCGAA CACCGTCCGC TACCGGCTGC GCCGGGCCCA GCATCTGTTG
GGCCGGGACC TCTCGGAGCC CAAGGAGCGC ACCGCCCTCG GCCTGGCGGC GTTCGTCTGG
CTGCGCGACC GGGACGGGCG CGGGGCCTCA GAGAAGACGG TCCAGCGCCG CCCCGACAAA
GCCTAG
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| Protein sequence | MRGWEGAAGL LRRAALEPAG RGAWVRLALE EAARAAPAAG TLLARPDPAG RERWLVEYAG
AAPEEVRRWA AGRLGSGEEE PGSGALWRGA PCLPDAPPRV FRVAGGLWVL WAFGPLEGRG
PELFRGAVEE LIQVERRERE HLGGGRLGEL VPALRSGDEE CLPELLELVR RVGRAEFAYW
GGVHDGVVEV RRHVGARSPG FGFELPLGEG VGGRAFAGRR PLEVADYLNC QYRYPGVSDA
TDSEGVRSVL ALPIGGREAG SGAVLYAVRR SVAPFSGEER ALLARLRDAL EPLETGRGAR
RAAAAGPGAL LLQRAGLRRL LLGSDRVREV EEWLEGVLRC RAVLVDAGGR PYAPESLDRL
ERLRLAGGRP RSLPLSGGRG SLLVWGGDLR VEGWPDLMED VLAAFRVILD RAERAHERLN
SRRSRWLRAV AAGQTGEEAR REGHRLGLPE ENGEVWAFAW EPDRAGGARL RMVADEVALD
MLDVPFITLE EGLGAVLVRG RPAHPPSAVR DALLRHFGPA PLWLVHGAGY ESLEGLEEAL
AMSLSAAEDL RRSRSGPYVC EVRGRGLDSL LDDPRLSGEL SGFAGRLLEP LLEHDGRHGT
RLTETFCLAL ALGSAEAAAD RLFVHPNTVR YRLRRAQHLL GRDLSEPKER TALGLAAFVW
LRDRDGRGAS EKTVQRRPDK A
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