Gene Rxyl_2342 details

Gene Information

• Locus tag: Rxyl_2342
• ID: 4115608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 2351171
• End bp: 2353153
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638037122
• Product: acetoacetyl-CoA synthetase
• Protein accession: YP_645082
• Protein GI: 108805145
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR01217] acetoacetyl-CoA synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGAGA CGACCGAAGG CGCCCTTCTC TGGGAGCCGT CCGAGGAGTT CAAGCGGAGC 
TGCACGATGT CCCGCTACAT GCGGTGGCTT GAGGAGAACA AAGGGCTCTC CTTCCCCGGC 
TACCACGAGC TGTGGGAGTG GTCGGTCACG GAGCTCGAGG ACTTCTGGGA GAGCGTCTGG 
GAGTTCTGCG GCGTGAGGGC CTCCAGGCCC TACGCGCGGG TTCTGGGCCG GCGCGAGATG 
CCGGGCGCCG AGTGGTTTGC CGGCGCGGAG CTGAACTACG CCGAGCACAT CCTCGGCGGA 
AACCGTCCCG GCGGGAGCGC CCTCGTCTCC CGCTCGGAGC TCAGGCCGCT CTCCTCGATG 
GGCTGGGAGG AGCTCGAGGA GCGGACGGCG GCGCTCGCCG CCGCGCTGCG GGAGGCCGGC 
GTGGGGCGCG GGGACAGGGT CGTGGCGTAC CTGCCCAACG TCCCGGAGGC GGTGGTGGGG 
CTCCTGGCGA CCGCCTCCCT CGGCGCCATC TGGTCCTCCT GCTCGCCGGA CTTCGGGGTG 
GGCAGCGTCA TAGACCGCTT CAAGCAGATA GAGCCCAAGG TGCTGCTGGC GGTGGACGGT 
TACCGCTACG GCGGCAGGGA CTACGACCGG ATGGGGGTCG TGGCCAGGGT GCAGCGGGAG 
ATCCCCTCGC TGCAGCGGAC GGTCGTGCTG CCCTACCTGA GCGCCGGCCC GGACACCGGG 
GCCCTCGAGA ACGCCGTGCT CTGGGAGGAC TTCGTCGGCC CGCACGCGGG GGCCGCGCTC 
TCCTTCGAGC AGGTGCCCTT CGACCACCCC CTGTGGGTGC TCTACTCCTC CGGCACCACC 
GGCTTGCCCA AGGCGATCGT GCAGGGCCAC GGGGGCATCC TGCTCGAGCA CCTCAAGGTC 
ATGGCGCTGC ACATGGACGT AAAGCCCGGC GACCGCTTCT TCTGGTTCAC CACCACCGGC 
TGGATGATGT GGAACATCGT GGTGGCGAGC CTTCTGTGCG GGGCCACGGC ACTGCTCTAC 
GACGGCAACC CCGGCCACCC GGACATGAAC GCCCTGTGGC GCTTTGCGGA GGAGACTGGG 
ATGAACGTCT TCGGCACCAG CGCCGCCTAC ATCACCGCCT GCATGAAGGC CGGCATAGAG 
CCGGGGCGCG AGTTCGACCT CTCCGCGCTC GGGGCCATAG GCTCGACCGG ATCGCCCCTC 
TCCCCGGAGG GCTTCGTGTG GGCCTACGAG CACGTAAAGC GCGACCACTG GCTCTTCTCC 
ACCAGCGGCG GCACCGACCT GTGCACCGCC TTCGTGGGCG GGGTGCCGCT GCTGCCGGTG 
CGCTGCGGGG AGCTGCAGGC CCGCTCGCTC GGGGCGAAGG TCGAGGCCTT CGACGAGGAG 
GGCAACCCCC TCATAGACGA GGTCGGGGAG CTCGTCATCA CCGAGCCCAT GCCCTCCATG 
CCGCTCTACT TCTGGAACGA CCCGGAGGGG AGGAGGCTCA GAGAGAGCTA CTTCAGCGTC 
TACCCCGGGG TGTGGCGGCA CGGGGACTGG ATCAAGATAA AGCGCCACGG CGGGTGCGTC 
ATCTACGGCA GGAGCGACTC CACCATAAAC CGCGGCGGCA TCAGGATGGG GACCGCCGAG 
ATCTACTCCG CCGTCGAGGG CGTCCCCCAG ATCGCCGACT CGCTCGTCGT CGACGTCCAG 
CGGCCCGACG GCTCGGCCTA CATGCCGCTG TTCGTGGTGC TCAGGGAGGG GGAGGAGCTC 
ACCGAGGAGC TGAAGGCCGA GATAAGGAGG CGCATAAGGG AGTACTGCTC GCCGCGCCAC 
GTGCCCGACG AGATCCTGGA GGTCCCCGAG ATACCGCGCA CCCTCAACGG GAAGAAGCTG 
GAGGTGCCGG TGAAGAAGAT CCTCTCCGGC ACCCCGCCCG AGAAGGCCGC AAGCCGCGAC 
TCGCTCTCCA ACCCGCGGGC GCTGGACCCG TTTATCGAGA TTGCCGGGAG GCTCGGCGCG 
TGA 

 

Protein sequence

MIETTEGALL WEPSEEFKRS CTMSRYMRWL EENKGLSFPG YHELWEWSVT ELEDFWESVW 
EFCGVRASRP YARVLGRREM PGAEWFAGAE LNYAEHILGG NRPGGSALVS RSELRPLSSM 
GWEELEERTA ALAAALREAG VGRGDRVVAY LPNVPEAVVG LLATASLGAI WSSCSPDFGV 
GSVIDRFKQI EPKVLLAVDG YRYGGRDYDR MGVVARVQRE IPSLQRTVVL PYLSAGPDTG 
ALENAVLWED FVGPHAGAAL SFEQVPFDHP LWVLYSSGTT GLPKAIVQGH GGILLEHLKV 
MALHMDVKPG DRFFWFTTTG WMMWNIVVAS LLCGATALLY DGNPGHPDMN ALWRFAEETG 
MNVFGTSAAY ITACMKAGIE PGREFDLSAL GAIGSTGSPL SPEGFVWAYE HVKRDHWLFS 
TSGGTDLCTA FVGGVPLLPV RCGELQARSL GAKVEAFDEE GNPLIDEVGE LVITEPMPSM 
PLYFWNDPEG RRLRESYFSV YPGVWRHGDW IKIKRHGGCV IYGRSDSTIN RGGIRMGTAE 
IYSAVEGVPQ IADSLVVDVQ RPDGSAYMPL FVVLREGEEL TEELKAEIRR RIREYCSPRH 
VPDEILEVPE IPRTLNGKKL EVPVKKILSG TPPEKAASRD SLSNPRALDP FIEIAGRLGA