| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2339 |
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| Symbol | |
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| ID | 4115605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2347551 |
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| End bp | 2349212 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037119 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_645079 |
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| Protein GI | 108805142 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG CCCACCTCGG GTTCTGGCCC CGGCGGATGC CCACCTCGCT CCCCCTGCCG
GCGGCCGGCG TTCACCACAA CCTGGAGGTT TCCGCCCGGC GCTATCCCGA GTGTCCGGCG
CTCGTCTACT ACGGGGAGGA GATCACCTAC CGCCGCCTCC TCGAGGAGTC CCGGCGGCTC
GCGGGCTACC TGCAGCGCGA GGCGGGGCTC TCGAAGGGGG ACAGGGTCCT GCTGTACATG
CAGAACAGCC CGCAGTTCGT CGTCGCCTAC TACGCGGCGC TGATGTCCGG CGGGGTGGTG
GTGCCGGCGA ACCCTATGCT CCTCACGGAG GAGCTCGAGC ACTACGTGGA GGACAGCGGC
GCCCGGCTGG CGCTCGTGGG TCAGGAGCTC CTTCCGCGGG TTCTGCCGCT CGCGGGGAGG
GAGGGCCTGG GGTGCGTGAT CGTCGCCGCC TACTCGGACT ACCTCCCGCC CGAGCCCGAG
GTGTCGGTCC CCGCCGAGGT GGCTGCGCCG CGCGAGACCC TCCGGGAGGA GCGGGTCATC
CTCTGGGAGG AGACCCTCCG GGCCGGGCTG TCCCCCGAGT CCGGCGGGCC GGGGCCGGAG
GACGTGGCGC TGCTCCCCTA CACCTCCGGG ACCACCGGCA GGCCCAAGGG GTGCGTCCAT
ACCCACCGCA CCGTGCAGGC TACCCTCGTC GGGGCCGGGC TCTGGGTGAA CCTCAACCCC
GCCTCCGTCG CGCTCGCCAC GCTGCCCCTC TTCCACGTGA CCGGGATGCA GCACAGCATG
AATGCACCGA TCTACTACGG CGGGACGGTC GTGCTCATGA CCCGCTGGGA CCGCGAGGCG
GCGGCACGCC TGATCGAACG CCGCCGCTGC ACCCACTGGA CCAACATCAG CACCATGGTT
GTGGACTTCC TCTCGCCGGG CGGCGTGGAG GGCGCCGACC TCTCCTCCCT GATGTGCGTC
GGCGGGGGAG GGGCTCCGCT GCCTGAGGCG GTCGGCGAGC GGCTGCACCG GCTGACCGGG
CTTCGCTACA TGGAGGGCTA CGGGCTCTCA GAGACGGTCT CCCAGACCCA CATGAACCCG
CCCGACCGCC CCAAGATGCA GTGCCTCGGC ATCCCCTCCT TCGACGTGGA CGCCCGCGTT
GTGGACCCGG ATACCCTGGA GGAGCTCGGC CCCGGGGAAC AGGGCGAGAT CGTGGTCTCC
GGCCCCCAGG TGATGCGCGG CTACTGGCAG CGGCCCGACG CCGACGCGGA GGTCTTCTTC
GAGCGTGACG GGCGGCGCTT TCTCCGGACC GGGGACCTCG GCCGCTACGA CGAGGAAGGC
TACTTCTTCA TGGTCGACCG CATAAAACGG ATGATCAACG CGGGCGGCTA CAAGGTCTGG
CCGGCCGAGG TGGAGTCGGT GCTCTACGCC CACCCCGCCG TGCGGGAGGT CTGCGTGATC
CGTTCGCCTG ACCCCCGGCG CGGGGAGACG GTGAAGGCCG TTGTGGTTCC CGCGGGGGAG
GTCTCCGGGG AGGAGGTAAT CTCCTGGGCC CGCGAGCGGC TCGCCGCCTA CAAGTGCCCC
CGGCTCGTCG AGTTCGTCGG GGAGCTCCCG AAGAGCGGGA GCGGCAAGAT CCTCTGGCGG
GCGCTCGGGG AGCGCGAGGA GCGGCGGGCC GTCCGCGGCT GA
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| Protein sequence | MTDAHLGFWP RRMPTSLPLP AAGVHHNLEV SARRYPECPA LVYYGEEITY RRLLEESRRL
AGYLQREAGL SKGDRVLLYM QNSPQFVVAY YAALMSGGVV VPANPMLLTE ELEHYVEDSG
ARLALVGQEL LPRVLPLAGR EGLGCVIVAA YSDYLPPEPE VSVPAEVAAP RETLREERVI
LWEETLRAGL SPESGGPGPE DVALLPYTSG TTGRPKGCVH THRTVQATLV GAGLWVNLNP
ASVALATLPL FHVTGMQHSM NAPIYYGGTV VLMTRWDREA AARLIERRRC THWTNISTMV
VDFLSPGGVE GADLSSLMCV GGGGAPLPEA VGERLHRLTG LRYMEGYGLS ETVSQTHMNP
PDRPKMQCLG IPSFDVDARV VDPDTLEELG PGEQGEIVVS GPQVMRGYWQ RPDADAEVFF
ERDGRRFLRT GDLGRYDEEG YFFMVDRIKR MINAGGYKVW PAEVESVLYA HPAVREVCVI
RSPDPRRGET VKAVVVPAGE VSGEEVISWA RERLAAYKCP RLVEFVGELP KSGSGKILWR
ALGEREERRA VRG
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