| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2330 |
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| Symbol | |
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| ID | 4117548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2339997 |
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| End bp | 2341340 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638037110 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_645070 |
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| Protein GI | 108805133 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.330424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGACG TCACGGTGGT AGGCGGCGGG CTCGCCGGGA GCGAGGCGGC CTGGCAGGCC
GCGCGGGCGG GTTGCCGGGT CGAGCTGTGG GAGATGCGCC CGGTGAAGGA GACCCCGGCC
CACCACACGG ACCTCTTCGC CGAGCTGGTG TGCTCCAACT CCCTGGGCAA CCGCTCCCCG
GAGACCGCCT CCGGGCTGCT GAAGGAGGAG CTCAGGCGGC TCGGCTCGGT GATCCTGCGC
TGCGCCGACG CCAACGCGGT CCCGGCCGGC GGCGCTCTGG GGGTCGCCCG CGAGGACTTC
GCCCGCGCCG TCACCGAGAC CGTCGGCTCC CACCCCAACA TAGAGGTGGT GAGGAGGGAG
GCCCGGGACA TCCCCGAGGG GCCGGCGGTC ATCGCCACGG GGCCCCTCAC CTCCGACGCG
CTGCACAGAA AGATAGAGGA GCTCTCCGGC GAGACCCTCT ACTTCTTCGA CGCCGCCTCC
CCCATCCTCC ACCGCGACTC CATAGACGAC TCCGTCGTCT ACCGGGCCTC CCGCTACGGC
CGGGGGGAGG CGGACTACCT CAACTGCCCG ATGGACGAGG AGACCTACTA CGCCTTCGTC
GAGGAGCTCG CGAGCGCGGA GCTCTCCCCC ATAAAGAAGT TCGAGGAGGA CATGTACTTC
GAAGGGTGCC TCCCGGTGGA GACCATCGCC CGCCGGGGCC CCGACACCCT GCGCTTCGGC
CCGATGAAGC CGGTGGGCCT GCCGGACCCC CGGACGGGCA GGGAGCCCTT CGCCGTCGTG
CAGCTCCGGC AGGACGACGC CGAGGGGCGC CTCTACAACA TCGTCGGCTT CCAGACCCGC
CTGCGGTGGG GCGAGCAGAA GCGGGTCTTC CGGATGATCC CCGGCCTGCA GCGCGCGGAG
TTCGCCCGCT TCGGGGTGAT GCACCGCAAC ACCTACCTGC CCTCCAACCG GATGCTGGAG
GCGACGATGA AGATCCGGAA CGCCCTGAGC GAGAGGCCCC TCTTCTTCGC CGGGCAGCTC
ACCGGGGTGG AGGGCTACGT GGAGAGCACC GCCATGGGCT ACATCGCCGG GACCAACGCC
GCGCGGGTCG CCCGCGGCCT CGAGCCCATC CGCTGGCCCG AGGGGACGAT GATGGGGGCG
CTCGCCCGCT ACATCACGAC CAAGGAGGGC ACCCTGCAGC CCATAAACTC CAACTGGGGG
CTCGTCCCGG CGCCGCCGAA GAGGGAGAAC GGCCGCCGCC TGGGCAGGCA GGAGCGCCGG
CGGCGGCAGG CGGAGATGGC GCTCGGGGTG CTCGAGCGCT TCGCGGGGGA GGTGCTCCGG
CCGCCGGTGG CCGCCGGCCG CTAG
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| Protein sequence | MPDVTVVGGG LAGSEAAWQA ARAGCRVELW EMRPVKETPA HHTDLFAELV CSNSLGNRSP
ETASGLLKEE LRRLGSVILR CADANAVPAG GALGVAREDF ARAVTETVGS HPNIEVVRRE
ARDIPEGPAV IATGPLTSDA LHRKIEELSG ETLYFFDAAS PILHRDSIDD SVVYRASRYG
RGEADYLNCP MDEETYYAFV EELASAELSP IKKFEEDMYF EGCLPVETIA RRGPDTLRFG
PMKPVGLPDP RTGREPFAVV QLRQDDAEGR LYNIVGFQTR LRWGEQKRVF RMIPGLQRAE
FARFGVMHRN TYLPSNRMLE ATMKIRNALS ERPLFFAGQL TGVEGYVEST AMGYIAGTNA
ARVARGLEPI RWPEGTMMGA LARYITTKEG TLQPINSNWG LVPAPPKREN GRRLGRQERR
RRQAEMALGV LERFAGEVLR PPVAAGR
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