| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2329 |
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| Symbol | |
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| ID | 4117547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2339037 |
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| End bp | 2339993 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638037109 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_645069 |
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| Protein GI | 108805132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.304126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCGGC TGGCGGTCCT GCGCGGCGGG CACTCCATGG AGAGGGACGT CTCCCTGGCC
ACCGGCAGGC GCGTCCAGCA CGCGCTGGAG AGGCTCGGCC ACGAGGTCCA CCCGATGGAC
GTGGAGGAGA CGACCACCGA GAGGCTCATC GAGCTCGAGC CCGCGGCGGT CTTCGTCTGC
CTGCACGGCC CCGGCGGGGA GGACGGCACG GTGCAGGCGC TGCTGGAGAC CCTGGGGATA
CCCTACACCG GCAGCGGGCC GCTCTCCTCC ATCCGCTGCA TGGACAAGGA CTACGCCAAG
CGGGCGCTGG CGGCGGCCGG GCTCCCCACG CCGCGCTTCT GCACCTTCGT GCGGCGGGCG
ATGAACGAGA TGGGGGCGGC GGCGGCCCTG AACGTCGCCG CGGACTCCCT GGGCTACCCG
CTGGTGGTCA AGCCCGCCCG GGAGGGCTCC AGCTTCGGGC TCTCGCGGGT GGAGCGGCCG
GAGGAGCTTC TCGACGCCGT CTACGAGGCG TTCGGCTACG ACGCCAAGAT CCTGCTGGAG
CGCTGGGTGG AGGGGAGGGA GGTCTCCGTC CCCATACTCG AGCCCGCCGG GGAGGCGCCG
CGGGCGCTCG GGCTGGTGGA GATAAGGCCG CGCGAGGGCG CCTACAACTT CCAGGCCAAG
TACACGCCCG GGATGACGGA CTTCGCGATC CCGGCGGAGC TCCCCCCCGG TACGGCCTCC
CGGCTGGAGG AGACGGCCCT CGCCGTCTAC CGCACCCTGG GCTGCTCGGG GTTCGCGCGG
GTGGACACCA TCGTGGAGGG GGAGACCCCC CAGGTGCTCG ACGTGAAGAC CATCCCCGGC
TTCACCGAGA CCTCGACCTT CCCGCTCGCC GCCGAGGCCG CGGGCCTCTC CTTCGAGCGC
CTGGTGGAGA TCATCCTGGA CTCCGCCCTC AGGACGGAGG CCGCCCCGAA GCTCTGA
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| Protein sequence | MVRLAVLRGG HSMERDVSLA TGRRVQHALE RLGHEVHPMD VEETTTERLI ELEPAAVFVC
LHGPGGEDGT VQALLETLGI PYTGSGPLSS IRCMDKDYAK RALAAAGLPT PRFCTFVRRA
MNEMGAAAAL NVAADSLGYP LVVKPAREGS SFGLSRVERP EELLDAVYEA FGYDAKILLE
RWVEGREVSV PILEPAGEAP RALGLVEIRP REGAYNFQAK YTPGMTDFAI PAELPPGTAS
RLEETALAVY RTLGCSGFAR VDTIVEGETP QVLDVKTIPG FTETSTFPLA AEAAGLSFER
LVEIILDSAL RTEAAPKL
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