Gene Rxyl_2326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2326 
Symbol 
ID4117544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2336522 
End bp2337136 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID638037106 
ProductHam1-like protein 
Protein accessionYP_645066 
Protein GI108805129 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATGAAA GCGAATGTAC CATAAAGGCC GTAAGGGTTG TAGACTTGCG CCCTATGAGG 
AGGAGGCCCG TCTTCGTCAC CGGGAACGAG AACAAGCTGC GGGAGGCCGA GCGCATCCTG
GGTTTTTCCC TGGAGCGCGC AGACCCGAAG GTGCCCGAGA TACAGTCCCC CGACATCGCG
GAGGTGGCCG GGGAGAAGGC CCGCGCGGCC CGAAAGGCCC TGGGGTGCCC GCCCCGGCCG
GTGGTGGTAG AGGACTCGGG GCTCGTCATC GAGGCCTGGG GCGGCCTCCC CGGCGCCTTC
ACCCGCTGGT TTCTGGCCGG GGTGGGCAAC GAGGGCATCC TGCGGATGCT CTCCTCCTTC
GAGAGCCGCG CGGCGCGCGC GGTCTGCGTC GTGGCCGTCG CCGACGCCTC GGGCGCGGTG
CACGCCTTCC GGGGCGAGGT GCCGGGCTCC ATCGCCCCCG AGCCGCGCGG GGGCGGCGGC
TTCGGGTGGG ACCCCATCTT CGTCCCCGAG GGCTCCCCTC TCACCTACGC CGAGATGGGG
GAGGAGAAGC ACCGCGCCTC CCACCGGGCC CTCGCCTTCC GGGCCGCGGC CGGGTGGTTC
GCGGAGGGGG CATAA
 
Protein sequence
MHESECTIKA VRVVDLRPMR RRPVFVTGNE NKLREAERIL GFSLERADPK VPEIQSPDIA 
EVAGEKARAA RKALGCPPRP VVVEDSGLVI EAWGGLPGAF TRWFLAGVGN EGILRMLSSF
ESRAARAVCV VAVADASGAV HAFRGEVPGS IAPEPRGGGG FGWDPIFVPE GSPLTYAEMG
EEKHRASHRA LAFRAAAGWF AEGA