| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2308 |
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| Symbol | |
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| ID | 4117527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2319383 |
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| End bp | 2321668 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638037089 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_645049 |
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| Protein GI | 108805112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0308818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGC GGCGCCGGCG GATGCGCAGG AGGGGCAGCC TCTGGTCCCG GGTCAGGACA
GCGCTCCTGG TCCTCGCGGG GATCACGGCC CTCAGCCTCG CCGGGCTTCT GGCCAGCTTC
TCCTACGCCT ACTACGCGCT GGCCGACGAC CTCCCGGACC TCGACGACTA CCGCTCCGTG
GAGCTGGCCC AGACCTCCGT CGTCTACGAC GCCGACGGCA ACGTCGTGGA CCAGCTCTAC
GGGGTGCAGA ACCGCTTCGT GGTCGAGCTG GACGAGATAG ACCCCACCCT GCGGAACGCG
GTGGTCGCCA TCGAGGACCA CCGGTTCTAC CAGCACCGGG GGGTGGACTT CCGGGCCATC
CTGCGGGCCG CCCGCACCAA CATAGCCACC ATGTCCATCC GCGAGGGCGG CTCCACCATC
ACCCAGCAGC TCATAAAGAA CACCTACATA GCCCAGGAGC AGCGCTCCGT CCCCAGCTTC
CAGCGCAAGA TCAACGAGGC CGCCCTGGCC TGGCAGTACG AGAAGGAGCA CTCGAAGCGG
GAGATCCTGG AGCAGTACCT GAACACCGTG TACTTCGGGC GGGGGGCCTA CGGGGCGGAG
GCCGCGGCGA GGACCTACTT CAACAAGAGC GCCGAGGACC TCACGCTCCC CGAGTCCGCG
CTGCTGGCCG GGATCATCAA CCTCCCGAGC GCCTACGACC CGTTCACCGA CCCCGAGAGC
GCCAGAAAAC GGCGCAACGT GGTGCTGGAC AGGATGCTCC GGTACGGCTA CATAACGAAG
GAGGAGCACG ACCGGGCGGT CCGGGCGCCG ATAGAGCTCA GCCGCGGCCG GATAGAGCCG
CGCAACGACA ACGAGTACTT CCTCGACGCG GTGCGCAAGG AGCTCGCCCG CGAGTACGGC
GAGGAGATGG TCTACGAGGG GGGGCTGAAG ATCTACACCA CCCTCGATCC CGACCTGCAG
GAGCTGGCCT CGCGCGCCGT GGACGCGGTG GTGAACCCGG AGGCCGGCGA CCCCTCGGCG
GCCCTGGTCT CCATAGACCC GAACACCGGG GCGGTGCGGG CGATGGTCGG CGGCTCGGAC
TTCGACCGGC TGAAGTTCAA TCTGGCCACC CAGGCGCGCC GGCAGCCGGG CAGCTCCTTC
AAGCCCTTCG TGCTGGCGGA GATGGTGGAC CAGGGCTACT CGCCGCAGAG CGTGTACGTC
TCCAGGCCGC TGCGCATCCC GATGCCCCCG GGCTCGGCCG AGCCTTACTA CGAGGTCTCC
AACTACGCGG ACGTGTTCCG CGGCCCGATC ACGGTGGAGG AGGCCACCGC CCAGTCGGAC
AACACGGTCT TCGTGCAGCT GGCGATGGAT TTGGGGCTCG AGAACGTGGT GGAGATGGCC
CACGAGCTGG GGATAAAGAG CGAGCTCGAG CCCTACCCCT CGACCGCCAT CGGCGGGCTC
GGCCAGGGCG TGAGCCCGCT GGAGATGGCC TCCGCCTACT CCACGTTCGC CAACGGCGGG
GTGCACATGG AGCCCTACCT GATCGAGAAA GTCACCACCG AGGAGAACGG CCGGGAGGTC
GTCCTGGAGG AGCACGAGCC TGAGGGGGAG CGGGTGCTGA GCCGGGACGA GGCCGCGGTG
GTCACCGAGA CCCTGCGGGC GGTGGTGGAG CGGGGGACGG CGAGCCTGTT CCACGACCTG
GACGCCGAGC TCGGACGCCC CTCGGCAGGC AAGACGGGGA CCACCGAGGA GTTCGCCGAC
GCCTGGTACG TGGGCTACAT CCCCCAGCTC GCCACGAGCG TCTGGGTCGG CTACCCGGGG
GAGCGGCGCC CGATGGTGAA CATCCGGGGC TACTCGGAGA TCAACGGTGA GAACTTCCCG
CTGGACATCT GGTCGCTGTA CATGCAGGGC GCCGTGCAGT ACTTCCCCGT CCAGCAGTTC
GACGTGCCGA GCCCGGACCT GGACCTGCGG GTGAGAAACG CGGGCCTGCT GGAGACCACC
GGCGAGGGGG AGACGACCTC GGGCGCGGCG GACGAGGAGA CCACCGGCCT CGTGGAGGAC
CTGCTGGACG GCGTGCTCGG CGAAGACGGC CGTGAAGAGG AGGGCCCCGC CCGCGAGCGC
CCGCGAACGC CCCCGCAGCG ACCCTCGCCC CAACCGCCGC CCCCGCCACA GCCCGCCCCC
CAGCCGGCGC CCCAGCCCGC CCCGGCCCCG CAGCCCGCCC CAGCCCCGCA GCCGGCCCCG
GCCCCGCAGC AGCCCGGCGG CTTCCCCGGC GGCGACGCCT TCGACAGCTG GGTCTTCGAG
GACTAG
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| Protein sequence | MSRRRRRMRR RGSLWSRVRT ALLVLAGITA LSLAGLLASF SYAYYALADD LPDLDDYRSV
ELAQTSVVYD ADGNVVDQLY GVQNRFVVEL DEIDPTLRNA VVAIEDHRFY QHRGVDFRAI
LRAARTNIAT MSIREGGSTI TQQLIKNTYI AQEQRSVPSF QRKINEAALA WQYEKEHSKR
EILEQYLNTV YFGRGAYGAE AAARTYFNKS AEDLTLPESA LLAGIINLPS AYDPFTDPES
ARKRRNVVLD RMLRYGYITK EEHDRAVRAP IELSRGRIEP RNDNEYFLDA VRKELAREYG
EEMVYEGGLK IYTTLDPDLQ ELASRAVDAV VNPEAGDPSA ALVSIDPNTG AVRAMVGGSD
FDRLKFNLAT QARRQPGSSF KPFVLAEMVD QGYSPQSVYV SRPLRIPMPP GSAEPYYEVS
NYADVFRGPI TVEEATAQSD NTVFVQLAMD LGLENVVEMA HELGIKSELE PYPSTAIGGL
GQGVSPLEMA SAYSTFANGG VHMEPYLIEK VTTEENGREV VLEEHEPEGE RVLSRDEAAV
VTETLRAVVE RGTASLFHDL DAELGRPSAG KTGTTEEFAD AWYVGYIPQL ATSVWVGYPG
ERRPMVNIRG YSEINGENFP LDIWSLYMQG AVQYFPVQQF DVPSPDLDLR VRNAGLLETT
GEGETTSGAA DEETTGLVED LLDGVLGEDG REEEGPARER PRTPPQRPSP QPPPPPQPAP
QPAPQPAPAP QPAPAPQPAP APQQPGGFPG GDAFDSWVFE D
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