| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2306 |
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| Symbol | |
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| ID | 4117525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2317478 |
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| End bp | 2318578 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638037087 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_645047 |
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| Protein GI | 108805110 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.136108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCTG AGGACACCAT GATGCTTGCT GACCGTGCCT ACGAGCTTCT CAGCAAGGGC
AGGAGCCAGG GTTTTCTCAG CGCGGAGGAC GTGGCGGATC TGGTGAGGGA GGGGGACCTC
TCGCCCGATG AGGCGGAGGA GCTCTACGCC ACGCTGGAGG AGGAGGACAT CACCCTCGTA
GACGAGGAGC TGGAGGGGGC GGCGGAGGTC ACTCCGGAGC GGGCCGCGGG CCGCGAGGGG
GACAACCCGG CCTCCCAGCT GGCCCACGCA GTGGCCACGG GGGACTCCAT CAGGATGTAC
CTCGCCGAGA TAGGGCGGGT TCCGCTGCTC ACCCACGCCG ACGAGATCCG GCTGGCCAAG
GCCATCTCCC GGGGCTGTAA GCGGAGCAAG GACAAGCTGG TGGAGGCCAA CCTGCGGCTG
GTGGTCTCCA TCGCCAAGAA GTACCGCAAC CGCGGCGTCT CCTTTCTCGA CCTCATCCAG
GAGGGGAACA TCGGGCTCAT CCGGGCGGCC GAGAAGTTCG ACTACCGCAA GGGCTTCAAG
TTCTCCACGT ACGCGACTTG GTGGATCAGG CAGGCCATAA CCCGCGCCAT CGCGGACAAG
GGGCGGACCA TCCGCATCCC GGTGCACATG GTGGAGAAGG TCAACAAGTA CCACAGGACC
CAGCGCCGGA TGACCCAGGC CCTCGGCCGC GAGCCGACCG ACGAGGAGGT GGCCGAGGAG
CTCGGCGTGC CGGTGGAGGA GGTGCTGCGG CTGCAGGAGA TCAGCCAGCG CTCCATCTCC
CTGGAGACCC CGGTCGGCGA CGACGAGTCC TCCTCGCTCG GGGACTTTCT CGAGGACGCC
AGCGCCGTAA CCCCCACCGA CGCCGTCAGC GAGTCGCTGC TCAAGCTGCA CCTGCGCGAG
GCGCTCGACG AGCTGCCAGA GCGGGAGCGC CAGATCATCG AGATGAGGTT CGGGATGAAG
GACGACCGGC CCCGGACCCT CGAGGAGGTC GGCCGCGAGT TCGACATCAC CCGCGAGCGG
GTGCGCCAGA TCCAGATGAA GACCCTCAAC CTGCTGCGCG AGCAGCGCCG CACCCAGAAC
CTGCGTGAGT ACCTCCACTA G
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| Protein sequence | MAAEDTMMLA DRAYELLSKG RSQGFLSAED VADLVREGDL SPDEAEELYA TLEEEDITLV
DEELEGAAEV TPERAAGREG DNPASQLAHA VATGDSIRMY LAEIGRVPLL THADEIRLAK
AISRGCKRSK DKLVEANLRL VVSIAKKYRN RGVSFLDLIQ EGNIGLIRAA EKFDYRKGFK
FSTYATWWIR QAITRAIADK GRTIRIPVHM VEKVNKYHRT QRRMTQALGR EPTDEEVAEE
LGVPVEEVLR LQEISQRSIS LETPVGDDES SSLGDFLEDA SAVTPTDAVS ESLLKLHLRE
ALDELPERER QIIEMRFGMK DDRPRTLEEV GREFDITRER VRQIQMKTLN LLREQRRTQN
LREYLH
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