| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2256 |
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| Symbol | |
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| ID | 4115199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2267216 |
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| End bp | 2268502 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638037035 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_644998 |
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| Protein GI | 108805061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000681381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGATTG TGATCATCGG CGGAGGGGTT GTCGGGCTTT GTTGCGCCCG CGAGATCGCC
CGGTGTGGGG GGGAGGTGAC GCTTGTCGAG AAGAACTGCT GTGGCGGGGC GACCTCGCTG
CGCAACGCTG GGCAGATCGT CCCCTCGCTG TGCACCCCAC TTGCCTCGCC GGGTGTCATG
AAGCAGGCCC TGAGGTGGCT CGTCCGGCGC GACAGCCCGC TCGGGTTGAG GGTGAGCCCA
GACCCAGAGT ACCTGGGCTG GCTGCTTCGC TTCGCGCTAA ACGCCTCCGA AGAGAAGTTC
CGGGAGTGCC TGAAGGCAGC CCTCGCGCTG GGTAGAGATA CCCATCTCCT CTTCGAAGAG
CTGCGCAAGG AGGGTGTAGA GTTCGAGATG CACAAGAAGG GTATGCTCTT CGCCACCCTC
TCCGAGGAGA CATTGCGTGA GGACGTCGAG ATCTACAGGA AGCTCGAGCG GGCCGGCTAT
GAGGGCCAAT ATGAAGTCCT CAGTGGCGAG GAGGCGCGCA GGATCGAGCC GTCGTTGAGC
AAGAGGGTGG TTGGGGGGAT CTTCGTGAAG GAGGAGCGGC ACGTCCGGCC CGAGAGTCTC
ATGCGAGGCT TGGTAGCGGA TCTCAGATCC AGAGGCGTGC AGATACTCGA GGGCACGGAG
GTCTACGGCC TCAAGAAGGG AGAGGGAGGC ACCTGGAGGG TGCTCACGCC CGAGGGAGAA
CTGGATGCGG ATCGGGTCCT CGTCGCTGCC GGTGTCTGGT CAAAGGAGCT GCTCGCCCAA
CTGGGGGTAA GGATTCCACT GGAGGCAGGC AAAGGATACA GCGTCACCTC GGTGGGGACG
GGAACACCGC CGGAGCGGCC GCTCAAGTTC GCCGAGGCCC AGGTCGTCGC AACCCCCTAC
GAAGGTGGTG TGAGGATCTC CGGGAGGTTT GAGCTCAGCG GGATCGACCT TTCTCTCCAA
CGCCGCAAGA TCGACTCGAT CATCCGCGCT GCCTCTCCGT ACCTGCGCGA CTGGAGACCA
GAGAAGCCGA GGCTGGAGTG GGTCGGGCTG CGTCCGGCCA CCCCCGATAG TCTACCCCTG
ATCGGCAAGG TGCCGAACTT GCCTAACCTC TACCTGGCCA CGGGACACGG GATGCTCGGC
TTGACCCACG CCCCCGCAAC GGCCAAAGCA ATAACGCCCC TGATTCTCGA AGAAAGGATG
GCGCCAGAGC TCAAACCGTT CAACGTCGGC AGAATATCAT ATAATGAGAT AGAATCAATG
CTTGCCAGGA AAATATCCCC ATGTTAA
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| Protein sequence | MRIVIIGGGV VGLCCAREIA RCGGEVTLVE KNCCGGATSL RNAGQIVPSL CTPLASPGVM
KQALRWLVRR DSPLGLRVSP DPEYLGWLLR FALNASEEKF RECLKAALAL GRDTHLLFEE
LRKEGVEFEM HKKGMLFATL SEETLREDVE IYRKLERAGY EGQYEVLSGE EARRIEPSLS
KRVVGGIFVK EERHVRPESL MRGLVADLRS RGVQILEGTE VYGLKKGEGG TWRVLTPEGE
LDADRVLVAA GVWSKELLAQ LGVRIPLEAG KGYSVTSVGT GTPPERPLKF AEAQVVATPY
EGGVRISGRF ELSGIDLSLQ RRKIDSIIRA ASPYLRDWRP EKPRLEWVGL RPATPDSLPL
IGKVPNLPNL YLATGHGMLG LTHAPATAKA ITPLILEERM APELKPFNVG RISYNEIESM
LARKISPC
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